| Literature DB >> 32194798 |
Xiang-Kun Wang1, Qiao-Qi Wang2, Jian-Lu Huang1,3, Lin-Bo Zhang4, Xin Zhou1, Jun-Qi Liu1, Zi-Jun Chen1, Xi-Wen Liao1, Rui Huang5, Cheng-Kun Yang1, Guang-Zhi Zhu1, Chuang-Ye Han1, Xin-Ping Ye1, Tao Peng1.
Abstract
Background: Hepatocellular carcinoma (HCC) has high morbidity and mortality and lacks effective biomarkers for early diagnosis and survival surveillance. Origin recognition complex (ORC), consisting of ORC1-6 isoforms, was examined to assess the potential significance of ORC isoforms for HCC prognosis.Entities:
Keywords: ORC1; ORC5; ORC6; biomarker; hepatocellular carcinoma.; origin recognition complex
Year: 2020 PMID: 32194798 PMCID: PMC7052853 DOI: 10.7150/jca.39163
Source DB: PubMed Journal: J Cancer ISSN: 1837-9664 Impact factor: 4.207
Figure 1Analysis of ORC1-6 isoforms in multiple cancers.
Figure 2Expression of ORC1-6 isoforms in normal liver and HCC tissues. A-F: Expression of ORC1-6 isoforms in normal liver and HCC tissues.
Analysis of ORC isoform expressions in HCC and NR.
| Gene | Reporter | Types | FC | P value | T test | Reference |
|---|---|---|---|---|---|---|
| ORC1 | IMAGE:194236 | HCC vs. NR | 1.477 | 1.34E-4 | 3.724 | Chen liver (Reference 55) |
| 205085 _at | HCC vs. NR | 1.156 | 0.001 | 3.287 | Roessler liver (Reference 56) | |
| 205085 _at | HCC vs. NR | 1.133 | 3.21E-9 | 5.933 | Roessler liver 2 (Reference 56) | |
| 205085 _at | HCC vs. NR | 1.052 | 0.021 | 2.109 | Mas liver (Reference 57) | |
| 205085 _at | HCC vs. NR | 1.271 | 0.007 | 2.613 | Wurmbach liver (Reference 58) | |
| ORC2 | 204853 _at | HCC vs. NR | 1.322 | 2.78E-5 | 4.620 | Mas liver (Reference 57) |
| ORC3 | IMAGE:260336 | HCC vs. NR | 1.789 | 6.71E-14 | 8.037 | Chen liver (Reference 55) |
| 210028_s_at | HCC vs. NR | 1.511 | 1.80E-31 | 12.701 | Roessler liver 2 (Reference 56) | |
| 210028_s_at | HCC vs. NR | 1.249 | 3.77E-4 | 3.609 | Mas liver (Reference 57) | |
| 210028_s_at | HCC vs. NR | 1.316 | 0.002 | 3.083 | Roessler liver (Reference 56) | |
| ORC4 | 203351_s_at | HCC vs. NR | 1.366 | 2.25E-19 | 9.367 | Roessler liver 2 (Reference 56) |
| 203351_s_at | HCC vs. NR | 1.287 | 0.011 | 2.417 | Roessler liver (Reference 56) | |
| 203352 _at | HCC vs. NR | 1.082 | 1.22E-5 | 4.268 | Roessler liver 2(Reference 56) | |
| ORC5 | 204957 _at | HCC vs. NR | 1.445 | 2.97E-22 | 10.185 | Roessler liver 2 (Reference 56) |
| 211212_at | HCC vs. NR | 1.217 | 2.02E-13 | 7.513 | Roessler liver 2 (Reference 56) | |
| 07-103594861 | HCC vs. NR | 1.053 | 1.71E-7 | 5.439 | Gurchard liver (Reference 59) | |
| 204957 _at | HCC vs. NR | 1.293 | 0.015 | 2.245 | Roessler liver (Reference 56) | |
| 211212_at | HCC vs. NR | 1.132 | 0.042 | 1.797 | Roessler liver (Reference 56) | |
| 204957 _at | HCC vs. NR | 1.275 | 0.009 | 2.575 | Wurmbach liver (Reference 58) | |
| ORC6 | 219105_x_at | HCC vs. NR | 1.690 | 4.12E-5 | 4.728 | Roessler liver (Reference 56) |
| 219105_x_at | HCC vs. NR | 2.002 | 1.26E-6 | 4.166 | Wurmbach liver (Reference 58) | |
| 219105_x_at | HCC vs. NR | 1.476 | 6.75E-23 | 10.623 | Roessler liver 2 (Reference 56) |
Note: HCC: hepatocellular carcinoma; NR: normal; FC: fold change; ORC1: origin recognition complex 1; ORC2: origin recognition complex 2; ORC3: origin recognition complex 3; ORC4: origin recognition complex 4; ORC5: origin recognition complex 5; ORC6: origin recognition complex 6.
Figure 3Expression and transcripts of ORC1-6 isoforms in normal liver and tumor tissues. A-F: Expression of ORC1-6 isoforms in normal liver and tumor tissues; G-L: Transcripts of ORC1-6 isoforms in normal liver and tumor tissues.
Figure 4Protein expression and localization of ORC1-6 isoforms in liver tissue and cell lines. A-F: Protein expression of ORC1-6 isoforms in liver tissues; G-L: Localization of ORC1-6 isoforms in cell lines.
Figure 5OS and RFS plots of patients expressing ORC1-6 isoforms in HCC. A-F: OS plots of patients expressing each of the ORC1-6 isoforms in HCC; G-L: RFS plots of patients expressing each of the ORC1-6 isoforms in HCC.
Figure 6Pearson correlation plots among ORC1-6 isoforms in HCC tissues. A-E: Pearson correlation plots between ORC1 and ORC2-6 isoforms; F-I: Pearson correlation plots between ORC2 and ORC3-6 isoforms; J-L: Pearson correlation plots between ORC3 and ORC4-6 isoforms; M-N: Pearson correlation plots between ORC4 and ORC5-6 isoforms; O: Pearson correlation plots between ORC5 and ORC6.
Figure 7Analysis of the expression of ORC1-6 isoforms at different disease stages. A-F: Analysis of ORC1-6 isoform expression at each disease stage.
Figure 8Analysis of mutations, survival plots and interaction networks of ORC1-6 isoforms in HCC and ICC. A-F: Analysis of mutations of ORC1-6 isoforms in HCC and ICC; G-H: OS and RFS in patients expressing ORC1-6 isoform mutations; I: Interaction network among ORC1-6 isoforms.
Figure 9Enriched biological processes, cellular components and molecular functions networks of ORC1-6 isoforms. A-C: Networks of ORC1-6 isoforms showing enriched cellular components (A), biological processes (B) and molecular functions (C).
Figure 10Enriched KEGG pathways, gene-gene and protein-protein interaction networks of ORC1-6 isoforms. A: Enriched KEGG pathways of ORC1-6 isoforms; B: Gene-gene interaction network of ORC1-6 isoforms; C: Protein-protein interaction network of ORC1-6 isoforms.