Literature DB >> 3219358

Mechanism of azide binding to chloroperoxidase and horseradish peroxidase: use of an iodine laser temperature-jump apparatus.

J F Holzwarth1, F Meyer, M Pickard, H B Dunford.   

Abstract

The kinetics of azide binding to chloroperoxidase have been studied at eight pH values ranging from 3.0 to 6.6 at 9.5 +/- 0.2 degrees C and ionic strength of 0.4 M in H2O. The same reaction was studied in D2O at pD 4.36. In addition, results were obtained on azide binding to horseradish peroxidase at pD 4.36 and pH 4.56. Typical relaxation times were in the range 10-40 microseconds. The value of kH/kD(on) for chloroperoxidase is 1.16, and kH/kD(off) is 1.7; corresponding values for horseradish peroxidase are 1.10 and 2.4. The H/D solvent isotope effects indicate proton transfer is partially rate controlling and is more important in the dissociation of azide from the enzyme-ligand complex. A mechanism is proposed in which hydrazoic acid binds to chloroperoxidase in a concerted process in which its proton is transferred to a distal basic group. Hydrogen bonding from the newly formed distal acid to the bound azide facilitates formation of hydrazoic acid as the leaving group in the dissociation process. The binding rate constant data, kon, can be fit to the equation kon = k3/(1 + KA/[H+]), where k3 = 7.6 X 10(7) M-1 S-1 and KA, the dissociation constant of hydrazoic acid, is 2.5 X 10(-5) M. The same mechanism probably is valid for the ligand binding to horseradish peroxidase.

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Year:  1988        PMID: 3219358     DOI: 10.1021/bi00417a062

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  2 in total

1.  The mechanism of inhibition of Ran-dependent nuclear transport by cellular ATP depletion.

Authors:  Eric D Schwoebel; Thai H Ho; Mary Shannon Moore
Journal:  J Cell Biol       Date:  2002-06-10       Impact factor: 10.539

Review 2.  Aspartate or arginine? Validated redox state X-ray structures elucidate mechanistic subtleties of FeIV = O formation in bacterial dye-decolorizing peroxidases.

Authors:  Marina Lučić; Michael T Wilson; Dimitri A Svistunenko; Robin L Owen; Michael A Hough; Jonathan A R Worrall
Journal:  J Biol Inorg Chem       Date:  2021-09-03       Impact factor: 3.358

  2 in total

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