| Literature DB >> 32188468 |
Varvara A Mironova1, Natalia V Shartova2, Andrei E Beljaev3, Mikhail I Varentsov1,4,5, Fedor I Korennoy6, Mikhail Y Grishchenko1,7.
Abstract
BACKGROUND: Between 1999 and 2008 Russia experienced a flare-up of transmission of vivax malaria following its massive importation with more than 500 autochthonous cases in European Russia, the Moscow region being the most affected. The outbreak waned soon after a decrease in importation in mid-2000s and strengthening the control measures. Compared with other post-eradication epidemics in Europe this one was unprecedented by its extension and duration.Entities:
Keywords: Autochthonous cases; Climate favourability; Environmental determinants; Geospatial analysis; Modelling; Re-introduction; Vivax malaria
Mesh:
Year: 2020 PMID: 32188468 PMCID: PMC7081549 DOI: 10.1186/s12936-020-03187-8
Source DB: PubMed Journal: Malar J ISSN: 1475-2875 Impact factor: 2.979
Fig. 1The dynamics of imported and autochthonous cases in Russia, 1994–2007
Climate and environmental variables
| Variable | Description and data source |
|---|---|
| Climate data | |
| Maximum temperature of the warmest month | Gridded data, average for 1970–2000 with a spatial resolution 1 × 1 km [ |
| Annual precipitation | |
| Natural environmental data | |
| Altitude above sea level | Digital terrain model ASTER DEM with a spatial resolution of 30 m |
| Vegetation density | The maximum green vegetation fraction [ |
| Landscape division | Regional vectorized landscape map [ |
| Man-made environmental data | |
| Building density | Open street map data |
| Density of roads | |
| Density of railways | |
| Distance to railway stations | |
| Density of cottage communities | Vectorized map of cottage communities’ locations [ |
| Distance to cottage communities | |
Fig. 2Autochthonous cases of vivax malaria in Moscow region, 1999–2008
Fig. 3Spatial heterogeneity of malaria cases distribution in Moscow region, 1999–2008. Purple marks the areas with high compactness of autochthonous cases calculated by ArcGis kernel function
Fig. 4The sums of effective temperatures accumulated per season in the Moscow region, 1999–2003
The duration of the effective infectivity season in various localities of Moscow region and the surrounding areas (days)
| Meteostation | Distance from Moscow centre, km, and the direction | 1999 | 2000 | 2001 | 2002 | 2003 | 2004 |
|---|---|---|---|---|---|---|---|
| Rural stations | |||||||
| Dmitrov | 66 N | 50 | 51 | 37 | 42 | 20 | 25 |
| Alexandrov | 99 NE | 44 | 52 | 36 | 37 | 16 | 18 |
| Volokolamsk | 109 NW | 46 | 48 | 36 | 42 | 15 | 37 |
| Mozhaysk | 103 W | 42 | 54 | 40 | 59 | 17 | 37 |
| New Jerusalem | 51 NW | 44 | 49 | 38 | 40 | 15 | 41 |
| Cherusti | 152 E | 54 | 54 | 38 | 35 | 20 | 43 |
| Naro-Fominsk | 68 SW | 42 | 50 | 38 | 42 | 16 | 38 |
| Serpukhov | 94 S | 42 | 57 | 43 | 61 | 17 | 44 |
| Kolomna | 103 SE | 61 | 57 | 44 | 61 | 23 | 47 |
| Klin | 85 NW | 50 | 53 | 36 | 37 | 13 | 22 |
| Pavlovsky Posad | 65 E | 58 | 59 | 39 | 60 | 19 | 45 |
| Petushki | 117 E | 58 | 59 | 41 | 50 | 24 | 47 |
| Maloyaroslavets | 110 SW | 43 | 54 | 39 | 42 | 15 | 39 |
| Kashira | 107 s | 55 | 56 | 42 | 44 | 20 | –a |
| Nemchinovka | 16 W | 60 | 58 | 42 | 64 | 24 | 45 |
| Sheremetyevo | 30 NW | 44 | 49 | 38 | 40 | 16 | 23 |
| Vnukovo | 30 SW | 55 | 51 | 39 | 44 | 20 | 41 |
| Small Sareevo | 27 W | 56 | 52 | 39 | 41 | 17 | 37 |
| Urban stations (City of Moscow) | |||||||
| Balchug (city center) | 0 | 73 | 70 | 51 | 78 | 30 | 57 |
| VDNHk (urban park) | 9 N | 62 | 59 | 41 | 62 | 21 | 41 |
| MSU (urban park) | 7 SW | 63 | 61 | 42 | 74 | 24 | 48 |
| Tushino | 18 NW | 59 | 55 | 39 | 61 | 20 | 41 |
aNo data available
Relation of cases of malaria transmission to certain landscapes units
| Landscape index [ | Landscape name [ | Number of cases of local transmission | Humidity pattern | Height above sea level, m |
|---|---|---|---|---|
| 29 | Moskvoretsko-Klyazminsky | 77 | Normal to very high | 160–200 |
| 54 | Moskvoretsky | 46 | Normal to very high | 130–160 |
| 56 | Aprelevsk-Kuntsevsky | 45 | Normal to very high | 160–190 |
| 80 | Schelkovsky | 45 | High and very high | 140–150 |
| 81 | Biserovsky | 20 | Increased to excess | 130–140 |
| 83 | Eleltrougolsky | 17 | Increased | 140–150 |
| 35 | Istrinsnsky | 15 | High and very high | 170–200 |
| 58 | Moskvoretsko-Bitsevsky | 15 | Normal | 160–180 |
| 57 | Teplostansky | 13 | Normal | 180–200 |
Fig. 5Distribution of malaria cases by landscape units The most affected landscape units are listed in Table 3
Fig. 6Response curves based on MaxEnt simulation results reflecting the influence of each of the significant spatial factors on the likelihood of appearance of autochthonous cases a building density; b distance to cottage communities; c density of railways; d density of roads; e distance to railway stations; f maximum green vegetation fraction; g landscape units; h altitude; i maximum temperature of the warmest month; j annual precipitation. Colour indicates mean value (red), standard deviation limits (blue)
Fig. 7Distribution of malaria cases and cottage communities
Fig. 8Modelling the degree of favourable conditions for the occurrence of malaria cases. Average values from 10 replications (red denotes a high degree of suitability; blue is a low degree). The values represent a probability that a set of explanatory variables within the certain cell is treated by the model as suitable for the emergence of a malaria case