Literature DB >> 32187889

GTP hydrolysis is modulated by Arg34 in the RASopathy-associated KRASP34R.

Asim K Bera1, Jia Lu1, Chunya Lu1,2, Lianbo Li1, Sudershan Gondi1, Wei Yan1, Andrew Nelson3, Goujun Zhang2, Kenneth D Westover1.   

Abstract

RAS proteins are commonly mutated in cancerous tumors, but germline RAS mutations are also found in RASopathy syndromes such as Noonan syndrome (NS) and cardiofaciocutaneous (CFC) syndrome. Activating RAS mutations can be subclassified based on their activating mechanisms. Understanding the structural basis for these mechanisms may provide clues for how to manage associated health conditions. We determined high-resolution X-ray structures of the RASopathy mutant KRASP34R seen in NS and CFCS. GTP and GDP-bound KRASP34R crystallized in multiple forms, with each lattice consisting of multiple protein conformations. In all GTP-bound conformations, the switch regions are not compatible with GAP binding, suggesting a structural mechanism for the GAP insensitivity of this RAS mutant. However, GTP-bound conformations are compatible with intrinsic nucleotide hydrolysis, including one that places R34 in a position analogous to the GAP arginine finger or intrinsic arginine finger found in heterotrimeric G proteins, which may support intrinsic GTP hydrolysis. We also note that the affinity between KRASP34R and RAF-RBD is decreased, suggesting another possible mechanism for dampening of RAS signaling. These results may provide a foothold for development of new mutation-specific strategies to address KRASP34R -driven diseases.
© 2020 Wiley Periodicals, Inc.

Entities:  

Keywords:  CFC syndrome; GAP-insensitive; GTPase; Noonan syndrome; RAS

Mesh:

Substances:

Year:  2020        PMID: 32187889      PMCID: PMC7495839          DOI: 10.1002/bdr2.1647

Source DB:  PubMed          Journal:  Birth Defects Res            Impact factor:   2.344


  41 in total

Review 1.  Substrate assisted catalysis -- application to G proteins.

Authors:  M Kosloff; Z Selinger
Journal:  Trends Biochem Sci       Date:  2001-03       Impact factor: 13.807

Review 2.  GEFs and GAPs: critical elements in the control of small G proteins.

Authors:  Johannes L Bos; Holger Rehmann; Alfred Wittinghofer
Journal:  Cell       Date:  2007-06-01       Impact factor: 41.582

3.  Potent and Selective Covalent Quinazoline Inhibitors of KRAS G12C.

Authors:  Mei Zeng; Jia Lu; Lianbo Li; Frederic Feru; Chunshan Quan; Thomas W Gero; Scott B Ficarro; Yuan Xiong; Chiara Ambrogio; Raymond M Paranal; Marco Catalano; Jay Shao; Kwok-Kin Wong; Jarrod A Marto; Eric S Fischer; Pasi A Jänne; David A Scott; Kenneth D Westover; Nathanael S Gray
Journal:  Cell Chem Biol       Date:  2017-08-03       Impact factor: 8.116

4.  Diversity of mechanisms in Ras-GAP catalysis of guanosine triphosphate hydrolysis revealed by molecular modeling.

Authors:  Bella L Grigorenko; Ekaterina D Kots; Alexander V Nemukhin
Journal:  Org Biomol Chem       Date:  2019-05-15       Impact factor: 3.876

5.  Mechanism of the intrinsic arginine finger in heterotrimeric G proteins.

Authors:  Daniel Mann; Christian Teuber; Stefan A Tennigkeit; Grit Schröter; Klaus Gerwert; Carsten Kötting
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-28       Impact factor: 11.205

6.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

7.  PHENIX: a comprehensive Python-based system for macromolecular structure solution.

Authors:  Paul D Adams; Pavel V Afonine; Gábor Bunkóczi; Vincent B Chen; Ian W Davis; Nathaniel Echols; Jeffrey J Headd; Li-Wei Hung; Gary J Kapral; Ralf W Grosse-Kunstleve; Airlie J McCoy; Nigel W Moriarty; Robert Oeffner; Randy J Read; David C Richardson; Jane S Richardson; Thomas C Terwilliger; Peter H Zwart
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

8.  The clinical KRAS(G12C) inhibitor AMG 510 drives anti-tumour immunity.

Authors:  Jude Canon; Karen Rex; Anne Y Saiki; Christopher Mohr; Keegan Cooke; Dhanashri Bagal; Kevin Gaida; Tyler Holt; Charles G Knutson; Neelima Koppada; Brian A Lanman; Jonathan Werner; Aaron S Rapaport; Tisha San Miguel; Roberto Ortiz; Tao Osgood; Ji-Rong Sun; Xiaochun Zhu; John D McCarter; Laurie P Volak; Brett E Houk; Marwan G Fakih; Bert H O'Neil; Timothy J Price; Gerald S Falchook; Jayesh Desai; James Kuo; Ramaswamy Govindan; David S Hong; Wenjun Ouyang; Haby Henary; Tara Arvedson; Victor J Cee; J Russell Lipford
Journal:  Nature       Date:  2019-10-30       Impact factor: 49.962

9.  KRAS Switch Mutants D33E and A59G Crystallize in the State 1 Conformation.

Authors:  Jia Lu; Asim K Bera; Sudershan Gondi; Kenneth D Westover
Journal:  Biochemistry       Date:  2017-12-28       Impact factor: 3.162

10.  Atypical KRASG12R Mutant Is Impaired in PI3K Signaling and Macropinocytosis in Pancreatic Cancer.

Authors:  G Aaron Hobbs; Nicole M Baker; Anne M Miermont; Ryan D Thurman; Mariaelena Pierobon; Timothy H Tran; Andrew O Anderson; Andrew M Waters; J Nathaniel Diehl; Bjoern Papke; Richard G Hodge; Jennifer E Klomp; Craig M Goodwin; Jonathan M DeLiberty; Junning Wang; Raymond W S Ng; Prson Gautam; Kirsten L Bryant; Dominic Esposito; Sharon L Campbell; Emanuel F Petricoin; Dhirendra K Simanshu; Andrew J Aguirre; Brian M Wolpin; Krister Wennerberg; Udo Rudloff; Adrienne D Cox; Channing J Der
Journal:  Cancer Discov       Date:  2019-10-24       Impact factor: 38.272

View more
  2 in total

1.  Active and Inactive Cdc42 Differ in Their Insert Region Conformational Dynamics.

Authors:  Nurit Haspel; Hyunbum Jang; Ruth Nussinov
Journal:  Biophys J       Date:  2020-12-19       Impact factor: 4.033

2.  KrasP34R and KrasT58I mutations induce distinct RASopathy phenotypes in mice.

Authors:  Jasmine C Wong; Pedro A Perez-Mancera; Tannie Q Huang; Jangkyung Kim; Joaquim Grego-Bessa; Maria Del Pilar Alzamora; Scott C Kogan; Amnon Sharir; Susan H Keefe; Carolina E Morales; Denny Schanze; Pau Castel; Kentaro Hirose; Guo N Huang; Martin Zenker; Dean Sheppard; Ophir D Klein; David A Tuveson; Benjamin S Braun; Kevin Shannon
Journal:  JCI Insight       Date:  2020-11-05
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.