| Literature DB >> 32183140 |
Katharigatta N Venugopala1,2, Pushpalatha Ramachandra3, Christophe Tratrat1, Raquel M Gleiser4, Subhrajyoti Bhandary5, Deepak Chopra5, Mohamed A Morsy1,6, Bandar E Aldhubiab1, Mahesh Attimarad1, Anroop B Nair1, Nagaraja Sreeharsha1, Rashmi Venugopala7, Pran Kishore Deb8, Sandeep Chandrashekharappa9, Hany Ezzat Khalil1,10, Osama I Alwassil11, Sara Nidal Abed8, Yazan A Bataineh8, Ramachandra Palenge3, Michelyne Haroun1, Shinu Pottathil12, Meravanige B Girish13, Sabah H Akrawi1, Viresh Mohanlall2.
Abstract
Malaria, affecting all continents, remains one of the life-threatening diseases introduced by parasites that are transmitted to humans through the bites of infected Anopheles mosquitoes. Although insecticides are currently used to reduce malaria transmission, their safety concern for living systems, as well as the environment, is a growing problem. Therefore, the discovery of novel, less toxic, and environmentally safe molecules to effectively combat the control of these vectors is in high demand. In order to identify new potential larvicidal agents, a series of 2-aryl-1,2-dihydroquinazolin-4-one derivatives were synthesized and evaluated for their larvicidal activity against Anopheles arabiensis. The in silico absorption, distribution, metabolism, excretion, and toxicity (ADMET) properties of the compounds were also investigated and most of the derivatives possessed a favorable ADMET profile. Computational modeling studies of the title compounds demonstrated a favorable binding interaction against the acetylcholinesterase enzyme molecular target. Thus, 2-aryl-1,2-dihydroquinazolin-4-ones were identified as a novel class of Anopheles arabiensis insecticides which can be used as lead molecules for the further development of more potent and safer larvicidal agents for treating malaria.Entities:
Keywords: 2,3-dihydroquinazolin-4-one; ADMET; Anopheles arabiensis; crystallography; docking; graphene oxide; larvicidal activity
Mesh:
Substances:
Year: 2020 PMID: 32183140 PMCID: PMC7144721 DOI: 10.3390/molecules25061316
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Representatives of 2,3-dihydroquinazolin-4(1H)-one derivatives as therapeutic agents.
Physicochemical characteristics of 2-(substituted phenyl)-2,3-dihydroquinazolin-4(1H)-ones (3a–n).
| Compound Code | Ar | Molecular Formula (Molecular Mass) | Yield (%) | m.p (°C) Reported | mp (°C) Found | cLog | References | CAS Number |
|---|---|---|---|---|---|---|---|---|
|
| 4-OCH3-Ph | C15H14N2O2 (254) | 95 | 182–183 | 181–182 | 2.2388 | [ | 61195-16-2 |
|
| 4-CN-Ph | C15H11N3O (249) | 92 | 178–180 | 178–180 | 1.7528 | [ | 219619-59-7 |
|
| 3-OH-Ph | C14H12N2O2 (240) | 91 | 184–186 | 185–187 | 1.6528 | [ | 107922-06-5 |
|
| 4-OCF3-Ph | C15H11F3N2O2 (308) | 94 | 194–196 | 195–196 | 3.3478 | [ | 685505-75-3 |
|
| 3-I-Ph | C14H11IN2O (349) | 92 | -- | 153–155 | 3.4428 | Novel Compound | |
|
| 4-Cl-Ph | C14H11ClN2O (258) | 87 | 197–198 | 198–199 | 3.0328 | [ | 13165-11-2 |
|
| 3,4-diOCH3-Ph | C16H16N2O3 (284) | 88 | 214–216 | 213–215 | 1.9778 | [ | 126492-17-9 |
|
| 4- | C16H17N3O (267) | 93 | 209–211 | 210–211 | 2.4848 | [ | 66181-66-6 |
|
| 3-NO2-Ph | C14H11N3O3 (269) | 91 | 192–194 | 192–1193 | 2.0628 | [ | 26029-30-1 |
|
| 4-F-Ph | C14H11FN2O (242) | 91 | 196–198 | 197–198 | 2.4628 | [ | 359605-44-0 |
|
| Imidazole | C11H10N4O (214) | 87 | -- | 156–158 | 0.1488 | Novel Compound | |
|
| 2-OCH3-4-NO2-Ph | C15H13N3O4 (299) | 93 | -- | 149–151 | 2.2818 | Novel Compound | |
|
| 2-OH, 5-NO2-Ph | C14H11N3O4 (285) | 89 | 244–246 | 245–246 | 1.9818 | [ | 1794721-69-9 |
|
| 4-OH-Ph | C14H12N2O2 (240) | 95 | 209–211 | 210–211 | 1.6528 | [ | 107920-18-3 |
Ar: Aromatic; m.p: Melting point; CAS: Chemical Abstracts Service.
Scheme 1Synthetic scheme for the construction of 2-(substituted phenyl)-2,3-dihydroquinazolin-4(1H)-ones (3a–n). Reagents and conditions: (a) graphene oxide (2.5%), water, stirred at room temperature; yield 82–95%.
Single-crystal X-ray data of title compound 2-(3,4-dimethoxyphenyl)-2,3-dihydroquinazolin-4(1H)-one (3g).
| CCDC Number | 1983734 |
|---|---|
| Molecular Formula | C16H16N2O3 |
| Molecular weight | 284.31 |
| Temperature | 173(2) |
| Crystal Size (mm) | 0.2, 0.110, 0.040 |
| Absorption coefficient (mm−1) | 0.096 |
| Tmin, Tmax | 0.981, 0.996 |
| Crystal system | Monoclinic |
| Lattice parameters: a (Å), b (Å), c (Å) | 7.8881(6), 20.2194 (13), 8.9638 (6) |
| 90, 104.887(3), 90 | |
| Space Group, Density, Z, Z′ | |
| hmin, max; kmin, max; lmin, max; | −8, 10; −26, 26; −11, 11 |
| Number of total/unique/observed reflections | 13,538, 3403, 2321 |
| No. of parameters | 200 |
| Independent reflections, Rint | 3403, 0.0482 |
| Rall, Robs | 0.0879, 0.0544 |
| wR2all, wR2obs | 0.1425, 0.1221 |
| Δρmax, min (eÅ−3) | 0.541, −0.269 |
| goodness-of-fit (G.o.F) | 1.029 |
Figure 2ORTEP representation (with 50% displacement ellipsoids) of the title compound (3g) showing the atom numbering scheme.
List of intermolecular interactions in the crystal structure of 2-(3,4-dimethoxyphenyl)-2,3-dihydroquinazolin-4(1H)-one (3g).
| Interaction | H···A (Å) | D···A (Å) | ∠D–H···A (°) | Symmetry Code |
|---|---|---|---|---|
| N1–H1···O2 | 2.30 | 3.176 | 170 | −x + 1, −y, −z + 2 |
| N2–H2···O3 | 2.30 | 3.070 | 148 | −x, −y, −z + 2 |
| C16–H16C···O1 | 2.66 | 3.441 | 137 | −x, −y, −z + 2 |
| C3–H3···O1 | 2.54 | 3.167 | 124 | x + 1,+y,+z |
| C2–H2C···O1 | 2.57 | 3.180 | 122 | x + 1,+y,+z |
| C2–H2C···O3 | 2.64 | 3.421 | 140 | −x + 1, −y, −z + 2 |
Figure 3Packing arrangement of molecules in the crystal structure via formation of tetramers involving N–H···O hydrogen bonds (H-bonds), C–H···O interactions, and π–π stacking interactions.
Mortality of Anopheles arabiensis larvae exposed to test compounds 3a–n at 4 µg/mL.
| Compound | 24-h Mortality | 48-h Mortality |
|---|---|---|
| 0.77 ± 0.04 d,e,f | 0.83 ± 0.04 c,d,e | |
| 0.86 ± 0.04 b,c,d,e | 0.88 ± 0.03 b,c,d | |
| 0.51 ± 0.05 h,i,j,k,l,m | 0.57 ± 0.05 h,i,j,k,l | |
| 0.91 ± 0.03 b,c | 0.93 ± 0.03 a,b | |
| 0.82 ± 0.04 c,d,e | 0.87 ± 0.04 b,c,d | |
| 0.87 ± 0.04 b,c,d | 0.91 ± 0.03 b,c | |
| 0.62 ± 0.05 g,h,i,j | 0.66 ± 0.05 f,g,h | |
| 0.41 ± 0.05 m | 0.43 ± 0.05 l,m | |
| 0.52 ± 0.05 h,i,j,k,l,m | 0.54 ± 0.05 h,i,j,k,l,m | |
| 0.89 ± 0.03 b,c | 0.91 ± 0.03 b,c | |
| 0.46 ± 0.05 k,l,m | 0.48 ± 0.05 j,k,l,m | |
| 0.74 ± 0.05 e,f,g | 0.77 ± 0.04 d,e,f | |
| 0.59 ± 0.05 h,i,j,k | 0.64 ± 0.05 f,g,h,i | |
| 0.50 ± 0.05 i,j,k,l,m | 0.52 ± 0.05 h,i,j,k,l,m | |
| Temephos | 0.99 ± 0.01 a | 1.00 ± 0.00 a |
| Acetone | 0.01 ± 0.01 m | 0.04 ± 0.02 n |
Means ± standard errors are shown. a–m Compounds sharing a letter do not differ significantly (p > 0.05).
In silico ADMET properties of quinazolines (3a–n) and Temephos.
| Entry | Solubility Level | Blood–Brain Barrier Penetration (BBB) Level | CYP450 Inhibition | Hepatotoxicity | Intestinal Absorption Level | Plasma Protein Binding | AlogP | PSA 2D |
|---|---|---|---|---|---|---|---|---|
| Temephos | 2 | 0 | - | + | 0 | + | 5.656 | 53.58 |
| 3 | 2 | - | + | 0 | + | 2.432 | 51.851 | |
| 3 | 2 | - | + | 0 | + | 2.327 | 65.856 | |
| 3 | 2 | - | + | 0 | + | 2.206 | 63.736 | |
| 1 | 1 | - | + | 0 | + | 4.568 | 51.851 | |
| 2 | 1 | - | + | 0 | + | 3.026 | 42.921 | |
| 2 | 1 | - | + | 0 | + | 3.113 | 42.921 | |
| 3 | 2 | - | + | 0 | + | 2.415 | 60.781 | |
| 3 | 2 | - | + | 0 | + | 2.610 | 46.273 | |
| 3 | 3 | - | + | 0 | + | 2.343 | 85.744 | |
| 3 | 2 | - | + | 0 | + | 2.654 | 42.921 | |
| 4 | 3 | - | + | 0 | - | 0.632 | 69.237 | |
| 3 | 2 | - | + | 0 | + | 2.326 | 94.674 | |
| 3 | 3 | - | + | 0 | + | 2.101 | 106.559 | |
| 3 | 2 | - | + | 0 | + | 2.206 | 63.736 |
Criteria: solubility level/drug-likeness: 0, extremely low/no; 1, very low/possible; 2, low/yes; 3, good/yes; 4, optimal/yes. BBB level (blood–brain barrier): 0, very high penetrant; 1, high; 2, medium; 3, low; 4, undefined. HIA level (human intestinal absorption): 0, good; 1, moderate; 2, poor; 3, very poor. PBB: plasma protein binding.
Binding energy and residue interactions of 2,3-dihydroquinazolin-4(1H)-one derivatives (3a–n) against G199S mutant acetylcholinesterase 1 (AChE1) (Protein Data Bank (PDB) code: 6ARY).
| Entry | Larvicidal Activity | Stereoisomer | Binding Energy (kJ/mol) | Residues Interaction | |
|---|---|---|---|---|---|
| H-Bond (Interacting Atom) | Hydrophobic (π–π) | ||||
| Native ligand | - | - | −46.68 | Ser 280, Tyr 282 | Gly 279, Trp 285, |
| Temephos | - | - | 0 | - | - |
| 0.77 |
| −93.21 | Trp 245 (NH), Tyr 489 (N | Trp 245, His 600 | |
|
| −114.50 | Gly 279 (NHC | Tyr 282, Trp 245, Tyr 489 | ||
| 0.86 |
| −98.03 | Ser 283 (N | Trp 245, Tyr 282, Asp 233 (ion-pi) | |
|
| −81.74 | Trp 245 (NH), Tyr 291 (CN) | Trp 245 | ||
| 0.51 |
| −99.16 | Ser 289 (NHC | Trp 245, Tyr 489 | |
|
| −89.42 | Ser 280 ( | Trp 245, Tyr 489 | ||
| 0.91 |
| −110.82 | Gly 278 (CF3), Tyr 291 (CF3) | Trp 245, Tyr 282, Asp 233 (ion-pi), Glu 359 (F), Gly 278 (F) | |
|
| −106.47 | Ser 283 (N | Trp 245, Tyr 282, Tyr 489 | ||
| 0.82 |
| −105.04 | Tyr 489 (NH) | Trp 245, Tyr 282, Tyr 489, Asn 246 (I) | |
|
| −75.88 | Trp 245 (NH) | Trp 245 | ||
| 0.87 |
| −108.19 | Ser 283 (N | Tyr 282, Trp 245, Asp 233 (ion-pi) | |
|
| −81.59 | Trp 245 (NH), Tyr 282 (NHC | Tyr 245 | ||
| 0.62 |
| −95.90 | Ser 283 (N | Trp 245, Tyr 282, Tyr 489 | |
|
| −91.29 | Trp 245 (NH), Tyr 282 (NHC | Tyr 245 | ||
| 0.41 |
| −92.98 | Tyr 489 (N | Trp 245, Tyr 282, Tyr 489 | |
|
| −91.01 | Ser 283 (N | Trp 245, Tyr 489 | ||
| 0.52 |
| −108.38 | Asp 233 (N | Trp 245, Tyr 282, Tyr 489 | |
|
| −131.24 | Ser 280 (NHC | Trp 245, Tyr 282 | ||
| 0.89 |
| −101.15 | Ser 283 (N | Trp 245, Tyr 489 | |
|
| −76.85 | Tyr 291 (NHC | Trp 245, Tyr 489 | ||
| 0.46 |
| −91.64 | Ser 283 (N | Trp 245 | |
|
| −80.14 | Ser 283 (N | Trp 245, Tyr 489 | ||
| 0.74 |
| −120.40 | Gly 279 (NHC | Trp 245, Tyr 489, His 600, Glu 359 (ion-pi) | |
|
| −89.15 | Ser 283 (N | Trp 245, Tyr 282, Tyr 489, Tyr 493 (ion-pi) | ||
| 0.59 |
| −127.01 | Ser 283 (N | Trp 245, Tyr 282, Tyr 489 | |
|
| −113.14 | Trp 245 (N | Trp 245, Glu 359 (ion-pi), His 600 (ion-pi) | ||
| 0.50 |
| −91.36 | Ser 280 (NHC | Trp 245, Tyr 282, Tyr 489 | |
|
| −121.58 | Ser 280 (NHC | Trp 245 | ||
Figure 4Predicted binding mode of both enantiomers of 3d in the G199S mutant AChE receptor (PDB: 6ARY). The molecular interactions are represented as green dotted lines for H-bonds, magenta dotted lines for π–π stacking interactions, and cyan dotted lines for fluorine contacts.