Literature DB >> 32180433

CpG-methylation-based risk score predicts progression in colorectal cancer.

Yao Deng1, Hao Wan1, Jianbo Tian1, Xiang Cheng2, Meilin Rao1, Jiaoyuan Li3, Hongli Zhang1, Ming Zhang1, Yimin Cai1, Zequn Lu1, Yue Li1, Siyuan Niu1, Na Shen3, Jiang Chang1, Zemin Fang4, Rong Zhong1.   

Abstract

Aim: To identify patients with colorectal cancer (CRC) who are at a truly higher risk of progression, which is key for individualized approaches to precision therapy. Materials & methods: We developed a predictor associated with progression-free interval (PFI) using The Cancer Genome Atlas CRC methylation data.
Results: The risk score was associated with PFI in the whole cohort (p < 0.001). A nomogram consisting of the risk score and other significant clinical features was generated to predict the 3- and 5-year PFI in the whole set (area under the curve: 0.79 and 0.71, respectively).
Conclusion: The risk score based on 23 DNA-methylation sites may serve as the basis for improved prediction of progression in patients with CRC in future clinical practice.

Entities:  

Keywords:  CpG sites; biomarkers; colorectal cancer; epigenetics; methylation; prognosis; progression-free interval

Year:  2020        PMID: 32180433     DOI: 10.2217/epi-2019-0300

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  4 in total

1.  Development and Validation of a Prognostic Nomogram Based on DNA Methylation-Driven Genes for Patients With Ovarian Cancer.

Authors:  Min Zhou; Shasha Hong; Bingshu Li; Cheng Liu; Ming Hu; Jie Min; Jianming Tang; Li Hong
Journal:  Front Genet       Date:  2021-09-09       Impact factor: 4.772

Review 2.  Machine Learning in Epigenomics: Insights into Cancer Biology and Medicine.

Authors:  Emre Arslan; Jonathan Schulz; Kunal Rai
Journal:  Biochim Biophys Acta Rev Cancer       Date:  2021-07-07       Impact factor: 10.680

3.  Nomograms that predict the survival of patients with adenocarcinoma in villous adenoma of the colorectum: a SEER-based study.

Authors:  Chao-Tao Tang; Ling Zeng; Jing Yang; Chunyan Zeng; Youxiang Chen
Journal:  BMC Cancer       Date:  2020-06-29       Impact factor: 4.430

4.  A novel prognostic risk score model based on immune-related genes in patients with stage IV colorectal cancer.

Authors:  Ke Xu; Jie He; Jie Zhang; Tao Liu; Fang Yang; Tao Ren
Journal:  Biosci Rep       Date:  2020-10-30       Impact factor: 3.840

  4 in total

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