Literature DB >> 32172289

Complete genome sequence of the endophytic bacterium Cellulosimicrobium sp. JZ28 isolated from the root endosphere of the perennial desert tussock grass Panicum turgidum.

Abdul Aziz Eida1, Salim Bougouffa2,3, Intikhab Alam2, Maged M Saad4, Heribert Hirt1,5.   

Abstract

Cellulosimicrobium sp. JZ28, a root endophytic bacterium from the desert plant Panicum turgidum, was previously identified as a plant growth-promoting bacterium. The genome of JZ28 consists of a 4378,193 bp circular chromosome and contains 3930 CDSs with an average GC content of 74.5%. Whole-genome sequencing analysis revealed that JZ28 was closely related to C. aquatile 3 bp. The genome harbors genes responsible for protection against oxidative, osmotic and salinity stresses, such as the production of osmoprotectants. It also contains genes with a role in the production of volatiles, such as hydrogen sulfide, which promote biotic and abiotic stress tolerance in plants. The presence of three copies of chitinase genes indicates a possible role of JZ28 as biocontrol agent against fungal pathogens, while a number of genes for the degradation of plant biopolymers indicates potential application in industrial processes. Genome sequencing and mining of culture-dependent collections of bacterial endophytes from desert plants provide new opportunities for biotechnological applications.

Entities:  

Keywords:  Cellulosimicrobium sp.; DARWIN21; Desert microbes; Endophyte; Genome sequence; Plant growth-promoting bacteria (PGPB)

Mesh:

Year:  2020        PMID: 32172289     DOI: 10.1007/s00203-020-01859-2

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  44 in total

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4.  Phylogenetically diverse endophytic bacteria from desert plants induce transcriptional changes of tissue-specific ion transporters and salinity stress in Arabidopsis thaliana.

Authors:  Abdul Aziz Eida; Hanin S Alzubaidy; Axel de Zélicourt; Lukáš Synek; Wiam Alsharif; Feras F Lafi; Heribert Hirt; Maged M Saad
Journal:  Plant Sci       Date:  2018-12-07       Impact factor: 4.729

5.  Signaling by hydrogen sulfide and cyanide through post-translational modification.

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Journal:  J Exp Bot       Date:  2019-08-19       Impact factor: 6.992

Review 6.  Reactive oxygen and oxidative stress tolerance in plant pathogenic Pseudomonas.

Authors:  Helen Fones; Gail M Preston
Journal:  FEMS Microbiol Lett       Date:  2011-11-25       Impact factor: 2.742

7.  Functional reconstitution and osmoregulatory properties of the ProU ABC transporter from Escherichia coli.

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8.  Desert plant bacteria reveal host influence and beneficial plant growth properties.

Authors:  Abdul Aziz Eida; Maren Ziegler; Feras F Lafi; Craig T Michell; Christian R Voolstra; Heribert Hirt; Maged M Saad
Journal:  PLoS One       Date:  2018-12-12       Impact factor: 3.240

9.  Production, purification and application of extracellular chitinase from Cellulosimicrobium cellulans 191.

Authors:  Luciana F Fleuri; Haroldo Y Kawaguti; Hélia H Sato
Journal:  Braz J Microbiol       Date:  2009-09-01       Impact factor: 2.476

10.  INDIGO - INtegrated data warehouse of microbial genomes with examples from the red sea extremophiles.

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Journal:  PLoS One       Date:  2013-12-06       Impact factor: 3.240

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  4 in total

1.  Cellulosimicrobium fucosivorans sp. nov., isolated from San Elijo Lagoon, contains a fucose metabolic pathway linked to carotenoid production.

Authors:  Fabiola A Aviles; John A Kyndt
Journal:  Arch Microbiol       Date:  2021-06-20       Impact factor: 2.552

2.  A genomic perspective on the potential of termite-associated Cellulosimicrobium cellulans MP1 as producer of plant biomass-acting enzymes and exopolysaccharides.

Authors:  Nguyen Thi-Hanh Vu; Tung Ngoc Quach; Xuan Thi-Thanh Dao; Ha Thanh Le; Chi Phuong Le; Lam Tung Nguyen; Lam Tung Le; Cuong Cao Ngo; Ha Hoang; Ha Hoang Chu; Quyet-Tien Phi
Journal:  PeerJ       Date:  2021-07-28       Impact factor: 2.984

Review 3.  Advancement in the molecular perspective of plant-endophytic interaction to mitigate drought stress in plants.

Authors:  Prafull Salvi; Himanshu Mahawar; Ruchi Agarrwal; Vibhav Gautam; Rupesh Deshmukh
Journal:  Front Microbiol       Date:  2022-09-02       Impact factor: 6.064

Review 4.  Actinobacteria From Desert: Diversity and Biotechnological Applications.

Authors:  Feiyang Xie; Wasu Pathom-Aree
Journal:  Front Microbiol       Date:  2021-12-09       Impact factor: 5.640

  4 in total

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