Literature DB >> 32170459

Nuclear pore complex-mediated gene expression in Arabidopsis thaliana.

Kentaro Tamura1.   

Abstract

Nuclear pore complexes (NPCs) are large multi-protein complexes that control bidirectional trafficking of macromolecules between the nucleus and cytoplasm. This trafficking is highly regulated and participates in a considerably broader range of cellular activities, including defense responses against pathogens in plants. Recently, NPC is emerging as a platform to physically associate the underlying chromatin with the nuclear periphery, thus regulating chromatin structure and gene expression. For instance, NPC components have been shown to promote the formation of specific genomics loops, which is linked to transcriptional memory for rapid reactivation of genes. With newly developed techniques and tools, our insight in this area has been substantially advanced. This review summarizes recent works on the molecular function of NPC machinery as hubs for transcriptional regulation and compares systems between plant and non-plant organisms.

Entities:  

Keywords:  Gene expression; Nuclear pore complex; Nucleoporin; Stress signaling

Mesh:

Substances:

Year:  2020        PMID: 32170459     DOI: 10.1007/s10265-020-01177-0

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   2.629


  68 in total

1.  SAGA complex mediates the transcriptional up-regulation of antiviral RNA silencing.

Authors:  Ida Bagus Andika; Atif Jamal; Hideki Kondo; Nobuhiro Suzuki
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-11       Impact factor: 11.205

Review 2.  The nuclear envelope and transcriptional control.

Authors:  Asifa Akhtar; Susan M Gasser
Journal:  Nat Rev Genet       Date:  2007-06-05       Impact factor: 53.242

3.  Chromatin-bound nuclear pore components regulate gene expression in higher eukaryotes.

Authors:  Maya Capelson; Yun Liang; Roberta Schulte; William Mair; Ulrich Wagner; Martin W Hetzer
Journal:  Cell       Date:  2010-02-05       Impact factor: 41.582

4.  The cpr5 mutant of Arabidopsis expresses both NPR1-dependent and NPR1-independent resistance.

Authors:  S A Bowling; J D Clarke; Y Liu; D F Klessig; X Dong
Journal:  Plant Cell       Date:  1997-09       Impact factor: 11.277

5.  Nuclear pore complex component MOS7/Nup88 is required for innate immunity and nuclear accumulation of defense regulators in Arabidopsis.

Authors:  Yu Ti Cheng; Hugo Germain; Marcel Wiermer; Dongling Bi; Fang Xu; Ana V García; Lennart Wirthmueller; Charles Després; Jane E Parker; Yuelin Zhang; Xin Li
Journal:  Plant Cell       Date:  2009-08-21       Impact factor: 11.277

6.  Arabidopsis histone acetyltransferase AtGCN5 regulates the floral meristem activity through the WUSCHEL/AGAMOUS pathway.

Authors:  Claire Bertrand; Catherine Bergounioux; Severine Domenichini; Marianne Delarue; Dao-Xiu Zhou
Journal:  J Biol Chem       Date:  2003-05-09       Impact factor: 5.157

7.  Nonrandom domain organization of the Arabidopsis genome at the nuclear periphery.

Authors:  Xiuli Bi; Ying-Juan Cheng; Bo Hu; Xiaoli Ma; Rui Wu; Jia-Wei Wang; Chang Liu
Journal:  Genome Res       Date:  2017-04-06       Impact factor: 9.043

Review 8.  Floppy but not sloppy: Interaction mechanism of FG-nucleoporins and nuclear transport receptors.

Authors:  Iker Valle Aramburu; Edward A Lemke
Journal:  Semin Cell Dev Biol       Date:  2017-06-30       Impact factor: 7.727

9.  DNA zip codes control an ancient mechanism for gene targeting to the nuclear periphery.

Authors:  Sara Ahmed; Donna G Brickner; William H Light; Ivelisse Cajigas; Michele McDonough; Alexander B Froyshteter; Tom Volpe; Jason H Brickner
Journal:  Nat Cell Biol       Date:  2010-01-24       Impact factor: 28.824

10.  Arabidopsis FORGETTER1 mediates stress-induced chromatin memory through nucleosome remodeling.

Authors:  Krzysztof Brzezinka; Simone Altmann; Hjördis Czesnick; Philippe Nicolas; Michal Gorka; Eileen Benke; Tina Kabelitz; Felix Jähne; Alexander Graf; Christian Kappel; Isabel Bäurle
Journal:  Elife       Date:  2016-09-28       Impact factor: 8.140

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  4 in total

1.  Toward an understanding of nuclear substructures beyond their classical functions.

Authors:  Yuki Sakamoto; Takuya Sakamoto
Journal:  J Plant Res       Date:  2020-07       Impact factor: 2.629

2.  Recent advances in understanding the biological roles of the plant nuclear envelope.

Authors:  Norman Reid Groves; Alecia Biel; Morgan Moser; Tyler Mendes; Katelyn Amstutz; Iris Meier
Journal:  Nucleus       Date:  2020-12       Impact factor: 4.197

Review 3.  Advancing knowledge of the plant nuclear periphery and its application for crop science.

Authors:  David E Evans; Sarah Mermet; Christophe Tatout
Journal:  Nucleus       Date:  2020-12       Impact factor: 4.197

Review 4.  Function of Nuclear Pore Complexes in Regulation of Plant Defense Signaling.

Authors:  Xi Wu; Junyou Han; Changkui Guo
Journal:  Int J Mol Sci       Date:  2022-03-11       Impact factor: 5.923

  4 in total

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