| Literature DB >> 32164384 |
Karolina Bakalorz1, Łukasz Przypis1, Mateusz Michał Tomczyk1, Maria Książek2, Ryszard Grzesik3, Nikodem Kuźnik1.
Abstract
Salens, as chelating, double Schiff base ligands, are an important group utilized in transition metal catalysis. They have been used to build interesting functional metal-organic frameworks (MOFs). However, salens interacting with amino acids have also found applications in receptors. Here, we intended to form a "green" glycine-derived salen fragment, but the available literature data were contradictory. Therefore, we optimized the synthetic conditions and obtained the desired product as two different crystallographic polymorphs (orthorhombic Pcca and monoclinic P21/c space groups). Their structures differ in conformation at the glycine moiety, and the monoclinic form contains additional, disordered water molecules. Despite the high stability of Schiff bases, these newly obtained compounds hydrolyze in aqueous media, the process being accelerated by metal cations. These studies, accompanied by mechanistic considerations and solid-state moisture and thermal analysis, clarify the structure and behavior of this amino acid Schiff base and shed new light on the role of water in its stability.Entities:
Keywords: conformation; glycine; hydrolysis; potassium complexes; salen; schiff-base
Mesh:
Substances:
Year: 2020 PMID: 32164384 PMCID: PMC7179422 DOI: 10.3390/molecules25051257
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Scheme 1Salen, aspartic acid derived salen, and salicyl-glycine Schiff base 1.
Survey of synthesis methods of 1 N-[(2-hydroxyphenyl)methylene]glycine found in the literature.
| Reference | Solvent | Reaction Time | Temperature | Product Form (Isolation Method) | Yield |
|---|---|---|---|---|---|
| [ | Water/EtOH 2:1 | 3 h | reflux | Solid (filtered, washed ethanol and ether, recrystallization ethanol:propanol mixture) | 66% |
| [ | Water + KOH/MeOH 1:1.5 | 1 h | r.t. | Not Separated (used as a solution) | not specified |
| [ | Water + NaOH/EtOH 1:3 | 2 h | 10 °C | Solid (filtered, recrystallization methanol:ether mixture) | 58% |
| [ | EtOH + KOH | 1 h | 50 °C | Solid (extracted with diethyl ether, and filtered off) | 63% |
| [ | EtOH + KOH | not specified | RT | Solid (extracted with diethyl ether, and filtered off) | 63% |
Scheme 2Synthesis of 1—potassium N-[(2-hydroxyphenyl)methylene]glycinate.
Figure 1Molecular structures of compounds 1a and 1b showing the atom-labeling scheme. Displacement ellipsoids are drawn at the 50% probability level.
Figure 2Packing diagram showing the seven-coordinate geometry of the K ion in 1a (i: 1 − x, y, 5/2 − z; ii: ½ + x, y, 2 − z; iii: 1 − x, −y, 2 − z; iv: 1 − x, y, 3/2 − z).
Hydrogen bonding geometry (Å, °) for structures 1a and 1b.
| Compound | D–H···A | d(D–H) | d(H···A) | d(D···A) | < (D–H···A) |
|---|---|---|---|---|---|
| 1a | N1-H1···O1 | 0.86 | 1.94 | 2.621(2) | 135.3 |
| N1-H1···O3 | 0.86 | 2.29 | 2.668(2) | 107.1 | |
| 1b | N1-H1···O1 | 0.88 | 1.92 | 2.606(5) | 133.8 |
| N1-H1···O2W | 0.88 | 2.44 | 3.017(8) | 124 | |
| C8-H8A···O3A i | 0.99 | 2.47 | 3.318(6) | 143 | |
| O2W-H2WA···O1 ii | 0.87 | 1.98 | 2.670(7) | 135.4 | |
| O2W-H2WB···O1 | 0.87 | 2.59 | 3.337(7) | 143.4 | |
| O2W-H2WB···O2 iii | 0.87 | 2.47 | 2.892(7) | 110.4 |
i: x, −y + 3/2, z − 1/2; ii: x, −y + 5/2, z − 1/2; iii: x, y + 1, z.
Figure 3Hydrolysis progress chromatograms of (A) reactions of ligand 1 with metal ions, (B) ligand 1 water solution.
Scheme 3Hydrolysis of 1 with a consecutive equilibrium.
Scheme 4Proposed reaction pathways.