Literature DB >> 32163673

The evolution of African swine fever virus in Sardinia (1978-2014) as revealed by whole-genome sequencing and comparative analysis.

Claudia Torresi1, Mariangela Fiori2, Luigi Bertolotti3, Matteo Floris4, Barbara Colitti3, Monica Giammarioli1, Silvia Dei Giudici2, Annalisa Oggiano2, Maja Malmberg5, Gian Mario De Mia1, Sándor Belák5, Fredrik Granberg5.   

Abstract

African swine fever (ASF) is a highly contagious and lethal viral disease of pigs and wild boars, which is enzootic in many African countries and on the Italian island of Sardinia, where it has been present since 1978. Previous genetic analyses of Sardinian ASF virus (ASFV) isolates have revealed that they all belong to p72 genotype I, with only minor sequence variations. However, these studies examined only a few selected genes. To distinguish between these closely related isolates and better investigate ASFV evolution in Sardinia, we sequenced the complete genomes of 12 Sardinian ASFV isolates collected between 1978 and 2012, and compared them with 47/Ss/2008 and 26544/OG10. Most of the observed changes occurred in a time-dependent manner; however, their biological significance remains unclear. As a whole, our results demonstrate the remarkable genetic stability of these strains, supporting a single-source introduction of the virus.
© 2020 Blackwell Verlag GmbH.

Entities:  

Keywords:  African swine fever virus; Sardinia; comparative genomics; next-generation sequencing

Year:  2020        PMID: 32163673     DOI: 10.1111/tbed.13540

Source DB:  PubMed          Journal:  Transbound Emerg Dis        ISSN: 1865-1674            Impact factor:   5.005


  8 in total

1.  ASF Exit Strategy: Providing cumulative evidence of the absence of African swine fever virus circulation in wild boar populations using standard surveillance measures.

Authors:  Søren Saxmose Nielsen; Julio Alvarez; Dominique Joseph Bicout; Paolo Calistri; Klaus Depner; Julian Ashley Drewe; Bruno Garin-Bastuji; Jose Luis Gonzales Rojas; Christian Gortazar Schmidt; Mette Herskin; Virginie Michel; Miguel Ángel Miranda Chueca; Paolo Pasquali; Helen Clare Roberts; Liisa Helena Sihvonen; Hans Spoolder; Karl Stahl; Antonio Velarde; Christoph Winckler; José Cortiňas Abrahantes; Sofie Dhollander; Corina Ivanciu; Alexandra Papanikolaou; Yves Van der Stede; Sandra Blome; Vittorio Guberti; Federica Loi; Simon More; Edvins Olsevskis; Hans Hermann Thulke; Arvo Viltrop
Journal:  EFSA J       Date:  2021-03-03

2.  Complete genome analysis of African swine fever virus responsible for outbreaks in domestic pigs in 2018 in Burundi and 2019 in Malawi.

Authors:  Jean N Hakizimana; Jean B Ntirandekura; Clara Yona; Lionel Nyabongo; Gladson Kamwendo; Julius L C Chulu; Désiré Ntakirutimana; Olivier Kamana; Hans Nauwynck; Gerald Misinzo
Journal:  Trop Anim Health Prod       Date:  2021-08-17       Impact factor: 1.559

3.  The first complete genome sequence of the African swine fever virus genotype X and serogroup 7 isolated in domestic pigs from the Democratic Republic of Congo.

Authors:  Patrick N Bisimwa; Juliette R Ongus; Lucilla Steinaa; Espoir B Bisimwa; Edwina Bochere; Eunice M Machuka; Jean-Baka Domelevo Entfellner; Edward Okoth; Roger Pelle
Journal:  Virol J       Date:  2021-01-21       Impact factor: 4.099

4.  First Genomic Evidence of Dual African Swine Fever Virus Infection: Case Report from Recent and Historical Outbreaks in Sardinia.

Authors:  Mariangela Stefania Fiori; Luca Ferretti; Matteo Floris; Federica Loi; Antonello Di Nardo; Anna Maria Sechi; Anna Ladu; Graziella Puggioni; Daria Sanna; Fabio Scarpa; Maria Luisa Sanna; Maria Paola Madrau; Claudia Torresi; Roberto Sirica; Eloisa Evangelista; Annalisa Oggiano; Silvia Dei Giudici
Journal:  Viruses       Date:  2021-10-25       Impact factor: 5.048

5.  Detection of African swine fever virus in pigs in Southwest Nigeria.

Authors:  Emmanuel Jolaoluwa Awosanya; Babasola Oluseyi Olugasa; Fufa Ido Gimba; Mohd Yusoff Sabri; Gabriel Adetunji Ogundipe
Journal:  Vet World       Date:  2021-07-19

6.  Surveillance and Control of African Swine Fever in the Early Phase of the COVID-19 Pandemic, March-May 2020: A Multi-Country E-Survey.

Authors:  Amélie Desvars-Larrive; Annemarie Käsbohrer
Journal:  Front Vet Sci       Date:  2022-06-06

Review 7.  African Swine Fever in Wild Boar in Europe-A Review.

Authors:  Carola Sauter-Louis; Franz J Conraths; Carolina Probst; Ulrike Blohm; Katja Schulz; Julia Sehl; Melina Fischer; Jan Hendrik Forth; Laura Zani; Klaus Depner; Thomas C Mettenleiter; Martin Beer; Sandra Blome
Journal:  Viruses       Date:  2021-08-30       Impact factor: 5.048

8.  A Deeper Insight into Evolutionary Patterns and Phylogenetic History of ASFV Epidemics in Sardinia (Italy) through Extensive Genomic Sequencing.

Authors:  Mariangela Stefania Fiori; Daria Sanna; Fabio Scarpa; Matteo Floris; Antonello Di Nardo; Luca Ferretti; Federica Loi; Stefano Cappai; Anna Maria Sechi; Pier Paolo Angioi; Susanna Zinellu; Roberto Sirica; Eloisa Evangelista; Marco Casu; Giulia Franzoni; Annalisa Oggiano; Silvia Dei Giudici
Journal:  Viruses       Date:  2021-10-04       Impact factor: 5.048

  8 in total

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