Literature DB >> 32153325

Evaluation of genetic diversity within asparagus germplasm based on morphological traits and ISSR markers.

Helong Chen1,2, Anping Guo2,3, Jian Wang3, Jianming Gao2, Shiqing Zhang2, Jinlong Zheng1, Xing Huang1, Jingen Xi1, Kexian Yi1.   

Abstract

Asparagus officinalis L. is a dioecious perennial plant globally known for its fine flavor and high nutritional value. An evaluation of genetic diversity in 46 asparagus accessions was carried out based on morphological and inter-simple sequence repeat (ISSR) markers. The result show that the coefficient of variation for 20 morphological characteristics is between 12.45 and 62.22%. Factor analysis revealed that nine factors explained 83.37% of the total variance. At Euclidean distance of 135.7, 46 accessions were divided into two clusters. Genetic similarity coefficient (GSC) based on ISSR data ranged from 0.60 to 0.97, suggesting a relatively abundant genetic base. Furthermore, the 46 asparagus accessions could also be grouped into three major clusters at a GSC of 0.74. And there is no significant relation between the two marker systems using the Mantel test. Clustering based on morphological traits compared with that based on ISSR data was not consistent, however, some common groupings were observed between two dendrograms. Therefore the results elucidated asparagus germplasm genetic background and determined hybrid parents, which will facilitate optimal application of asparagus germplasm resources and provide additional data for genetic improvement. © Prof. H.S. Srivastava Foundation for Science and Society 2020.

Entities:  

Keywords:  Asparagus; Genetic diversity; Genetic relationship; ISSR; Morphological traits

Year:  2020        PMID: 32153325      PMCID: PMC7036371          DOI: 10.1007/s12298-019-00738-5

Source DB:  PubMed          Journal:  Physiol Mol Biol Plants        ISSN: 0974-0430


  13 in total

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2.  Analysis of gene diversity in subdivided populations.

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Authors:  C. Mattioni; M. Casasoli; M. Gonzalez; R. Ipinza; F. Villani
Journal:  Theor Appl Genet       Date:  2002-02-08       Impact factor: 5.699

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Authors:  Charles J Baxter; Christine H Foyer; Janice Turner; Stephen A Rolfe; W Paul Quick
Journal:  J Exp Bot       Date:  2003-06-18       Impact factor: 6.992

8.  Genetic diversity analysis of wild close relatives of barley from Tibet and the Middle East by ISSR and SSR markers.

Authors:  Aihua Wang; Zhiyong Yu; Yi Ding
Journal:  C R Biol       Date:  2009-01-31       Impact factor: 1.583

9.  ISSR markers show differentiation among Italian populations of Asparagus acutifolius L.

Authors:  Maria Sica; Graziella Gamba; Stefania Montieri; Luciano Gaudio; Serena Aceto
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10.  Comparison of similarity coefficients used for cluster analysis with amplified fragment length polymorphism markers in the silkworm, Bombyx mori.

Authors:  Seyed Benyamin Dalirsefat; Andréia da Silva Meyer; Seyed Ziyaeddin Mirhoseini
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  1 in total

1.  Analysis of genetic diversity and population structure in Asparagus species using SSR markers.

Authors:  Manish Kapoor; Pooja Mawal; Vikas Sharma; Raghbir Chand Gupta
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  1 in total

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