| Literature DB >> 32149159 |
Yi-Ming Chen1,2,3, Wei-Ting Hung1,4, Wan-Chun Chang5, Chia-Wei Hsieh1,3, Wen-Hung Chung5,6,7,8, Joung-Liang Lan9,10,11, Ning-Rong Gung9, Yun-Shien Lee12, Der-Yuan Chen9,10,13, Shuen-Iu Hung5,6,7,8,14.
Abstract
Adult-onset Still's disease (AOSD) is a rare and inflammatory disorder characterized by spiking fever, rash, arthritis, and multisystemic involvement. HLA has been shown to be associated with AOSD; however, it could not explain the innate immunity and autoinflammatory characteristics of AOSD. To assess the genetic susceptibility of AOSD, we conducted a genome-wide association study (GWAS) on a cohort of 70 AOSD cases and 688 controls following a replication study of 36 cases and 200 controls and meta-analysis. The plasma concentrations of associated gene product were determined. The GWAS, replication, and combined sample analysis confirmed that SNP rs11102024 on 5'-upstream of CSF1 encoding macrophage colony-stimulating factor (M-CSF) was associated with AOSD (P = 1.20 × 10-8, OR (95% CI): 3.28 (2.25~4.79)). Plasma levels of M-CSF increased in AOSD patients (n = 82, median: 9.31 pg/mL), particularly in the cases with activity score ≥ 6 (n = 42, 10.94 pg/mL), compared to the healthy donors (n = 68, 5.31 pg/mL) (P < 0.0001). Patients carrying rs11102024TT genotype had higher M-CSF levels (median: 20.28 pg/mL) than those with AA genotype (6.82 pg/mL) (P < 0.0001) or AT genotype (11.61 pg/mL) (P = 0.027). Patients with systemic pattern outcome were associated with elevated M-CSF and frequently observed in TT carriers. Our data suggest that genetic variants near CSF1 are associated with AOSD and the rs11102024 T allele links to higher M-CSF levels and systemic outcome. These results provide a promising initiative for the early intervention and therapeutic target of AOSD. Further investigation is needed to have better understandings and the clinical implementation of genetic variants nearby CSF1 in AOSD.Entities:
Year: 2020 PMID: 32149159 PMCID: PMC7042538 DOI: 10.1155/2020/8640719
Source DB: PubMed Journal: J Immunol Res ISSN: 2314-7156 Impact factor: 4.818
Demographic data, clinical characteristics, and laboratory findings of 106 patients with adult-onset Still's disease (AOSD).
| Characteristics∗ | AOSD patients |
|---|---|
| Age at study entry (mean ± SD, years) | 42.9 ± 15.0 |
| Females, | 72 (67.9%) |
| Fever (≧39°C), | 102 (96.2%) |
| Evanescent rash, | 94 (88.7%) |
| Arthralgia or arthritis, | 78 (73.6%) |
| Sore throat, | 74 (69.8%) |
| Liver dysfunction, | 42 (39.6%) |
| Lymphadenopathy, | 39 (36.8%) |
| Hepatosplenomegaly, | 14 (13.2%) |
| White blood cell count (mean ± SD, cells/microliter) | 16205 ± 11673 |
| Platelet count (mean ± SD, ×103/cumm) | 351.5 ± 151.0 |
| ESR values (mean ± SD, mm/1st hour) | 78.4 ± 36.6 |
| CRP levels (mean ± SD, mg/dL) | 10.2 ± 7.8 |
| Ferritin levels (mean ± SD, | 8989 ± 15328 |
| Clinical activity score (mean ± SD) | 5.48 ± 1.11 |
∗Data are presented as the mean ± standard deviation (SD) or number (percentage). Liver dysfunction was defined as alanine aminotransferase (ALT) level≧40 IU/L. ESR: erythrocyte sedimentation rate; CRP: C-reactive protein.
Figure 1Genome-wide association scan for AOSD. Manhattan plot shows association between 645,983 SNPs and AOSD. Each dot represents a –log10 (P value) derived with a logistic regression model adjusted by sex and principal components (PCs) in 70 AOSD cases and 688 population controls. The red horizontal line marks the level of significance suggestive of association (P < 1 × 10−6). The top 4 AOSD-associated variants are labeled with the name of the nearest gene(s). CSF1: colony-stimulating factor 1; RPL3P8: ribosomal protein L3 pseudogene 8; LOC100419782: pseudogene; TCF4: transcription factor 4.
Association between the top 4 significant SNPs and AOSD in the initial GWAS screen.
| rs ID | Nearby gene | Chromosome position | Location | Minor allele | AOSD cases ( | Controls ( |
| Odds ratio1 (95% CI) | HWE | Call rate3 |
|---|---|---|---|---|---|---|---|---|---|---|
| MAF | MAF | |||||||||
| rs11102024 |
| 1 : 110431514 | 5′UTR | T | 47/14/9 | 587/97/3 | 3.70 × 10−7 | 3.27 (2.07~5.17) | 0.64 | 99.9% |
| 22.9 | 7.5 | |||||||||
| rs35910146 |
| 7 : 109659225 | Upstream | T | 28/33/8 | 468/186/15 | 1.33 × 10−7 | 3.11 (2.04~4.75) | 0.49 | 97.4% |
| 35.5 | 16.1 | |||||||||
| rs6948305 |
| 7 : 109757108 | Upstream | G | 30/32/8 | 477/197/14 | 6.43 × 10−7 | 2.93 (1.92~4.47) | 0.22 | 100% |
| 34.3 | 16.4 | |||||||||
| rs9636107 |
| 18 : 53200117 | Intron | G | 35/30/5 | 525/159/4 | 6.87 × 10−7 | 3.35 (2.08~5.40) | 0.03 | 100% |
| 28.6 | 12.1 |
The genomic coordinates are based on NCBI Human Genome Build 37 (GRCh37). Gene ID: CSF1 (colony-stimulating factor 1; NCBI Entrez Gene 1435), RPL3P8 (ribosomal protein L3 pseudogene 8; NCBI Entrez Gene 646620), LOC100419782 (zinc finger protein 717 pseudogene; NCBI Entrez Gene 100419782), and TCF4 (transcription factor 4; NCBI Entrez Gene 6925). MAF: minor allele frequency; 95% CI: 95% confidence interval; 5′UTR: 5′ untranslated region. 1P values and odds ratio were derived with a logistic regression model adjusted by sex and principal components (PCs) in 70 AOSD cases and 688 population controls. 2Hardy-Weinberg equilibrium (HWE), P values for 688 controls from the general population. 3Cell rate is for overall samples (70 AOSD and 688 controls).
Association of rs11102024 with adult-onset Still's disease (AOSD) in the GWAS discovery, replication, and combined sample analyses.
| GWAS discovery (70 AOSD cases versus 688 population controls) | Replication analysis (36 AOSD cases versus 200 population controls) | Combined sample analysis (106 AOSD cases versus 888 population controls) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SNP | Allele | MAF of cases | MAF of controls |
| Odds ratio1 | MAF of cases | MAF of controls |
| Odds ratio (95% CI) |
| Odds ratio (95% CI) | HWE3 |
|
| rs11102024 | A/T | 22.9 | 7.5 | 3.70 × 10−7 | 3.27 (2.07~5.17) | 16.7 | 7.5 | 0.022 | 2.47 (1.20~5.08) | 1.20 × 10−8 | 3.28 (2.25~4.79) | 0.33 | 0.36 |
MAF: minor allele frequency; OR: odds ratio; 95% CI: 95% confidence interval. 1P value and odds ratio were derived by logistic regression adjusted with sex and principal components (PCs) from the GWAS discovery result. 2P values were calculated by Fisher's exact test for the risk allele. 3Hardy-Weinberg equilibrium (HWE); P values for 888 controls from the general population. 4.Phet: P value of the heterogeneity test between studies.
Figure 2Meta-analysis of the genetic association between rs11102024 and adult-onset Still's disease (AOSD). M-H: Mantel-Haenszel test.
Figure 3Increase of plasma M-CSF (macrophage colony-stimulating factor) levels in AOSD patients and correlation with the activity score, disease outcomes, and genotypes of SNP rs11102024 nearby CSF1 gene. (a, b) The plasma levels of M-CSF protein were determined in the samples of healthy controls (n = 68) and AOSD patients (n = 82). (a) A significant increase of plasma M-CSF levels was detected in the AOSD patients compared to those of healthy controls. (b) The plasma levels of M-CSF are significantly increased in AOSD patients with activity scores 6-8, compared to those of AOSD patients with activity scores 3-5. (c, d) The AOSD patients (n = 82) were divided into three groups according to the genotype of rs11102024. (c) AOSD patients carrying the SNP rs11102024 TT genotype showed significantly higher levels of M-CSF (n = 10, median: 20.28 pg/mL), compared to the carriers of AA genotype (n = 55; median: 6.82 pg/mL) (P < 0.0001) and AT genotype (n = 17; median: 11.61 pg/mL) (P = 0.027). (d) A significant increase of plasma M-CSF levels was detected in AOSD patients with rs11102024 TT genotype than those of AA/AT genotypes. (e) Correlation between the plasma levels of M-CSF and disease outcome of 82 AOSD patients (systemic pattern (n = 64) and chronic articular pattern (n = 18)). AOSD patients with the systemic pattern showed a significant increase of M-CSF (median: 10.79 pg/mL) compared to those with chronic articular pattern (median: 6.23 pg/mL). These results are expressed as the mean ± SEM with each dot representing the data of an individual. Statistical analysis was performed using a two-tailed, nonparametric Mann-Whitney U test.