| Literature DB >> 32148870 |
Inna S Safyanova1, Oksana A Bondar1, Anna V Pavlishchuk1, Iryna V Omelchenko2, Turganbay S Iskenderov1, Valentina A Kalibabchuk3.
Abstract
The title compound represents the thallium(I) salt of a substituted 1,2,5-oxa-diazole, [Tl(C3H3N4O3)] n , with amino- and hydroxamate groups in the 4- and 3- positions of the oxa-diazole ring, respectively. In the crystal, the deprotonated hydroxamate group represents an inter-mediate between the keto/enol tautomers and forms a five-membered chelate ring with the thallium(I) cation. The coordination sphere of the cation is augmented to a distorted disphenoid by two monodentately binding O atoms from two adjacent anions, leading to the formation of zigzag chains extending parallel to the b axis. The cohesion within the chains is supported by π-π stacking [centroid-centroid distance = 3.746 (3) Å] and inter-molecular N-H⋯N hydrogen bonds. © Safyanova et al. 2020.Entities:
Keywords: 1,2,5-oxadiazole; crystal structure; hydroxamic acid; tautomerism; thallium(I)
Year: 2020 PMID: 32148870 PMCID: PMC7057383 DOI: 10.1107/S2056989020001577
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1A fragment of the crystal structure of 1 showing the coordination environment of the Tl1 ions with displacement ellipsoids drawn at the 50% probability level. [Symmetry codes: (i) 1 + x, y, z; (ii) 1 − x, + y, − z; (iii) 1 + x, 1 + y, z; (iv) 1 − x, − + y, − z; (v) 1 − x, + y, − z.]
Figure 2The formation of polymeric zigzag chains in 1. [Symmetry codes: (i) 1 + x, y, z; (ii) 1 − x, + y, − z; (iii) 1 + x, 1 + y, z; (iv) 1 − x, − + y, − z; (v) 1 − x, + y, − z.]
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N4—H4 | 0.93 | 2.23 | 3.156 (10) | 169 |
| N4—H4 | 1.01 | 2.65 | 3.256 (13) | 118 |
Symmetry codes: (i) ; (ii) .
Figure 3Packing diagram of 1, with hydrogen bonds indicated by dashed lines.
Figure 4Synthesis scheme for 4-amino-1,2,5-oxadiazole-3 hydroxamate thallium(I).
Experimental details
| Crystal data | |
| Chemical formula | [Tl(C3H3N4O3)] |
|
| 347.46 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 298 |
|
| 10.0731 (4), 3.74576 (18), 16.9805 (6) |
| β (°) | 95.808 (4) |
|
| 637.41 (5) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 25.30 |
| Crystal size (mm) | 0.2 × 0.2 × 0.2 |
| Data collection | |
| Diffractometer | Agilent Xcalibur Sapphire3 CCD |
| Absorption correction | Multi-scan ( |
|
| 0.231, 1.000 |
| No. of measured, independent and observed [ | 4634, 1452, 1320 |
|
| 0.056 |
| (sin θ/λ)max (Å−1) | 0.650 |
| Refinement | |
|
| 0.045, 0.111, 1.07 |
| No. of reflections | 1452 |
| No. of parameters | 100 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 6.17, −2.23 |
Computer programs: CrysAlis PRO (Agilent, 2012 ▸), SHELXT (Sheldrick, 2015 ▸), olex2.refine (Bourhis et al., 2015 ▸) and OLEX2 (Dolomanov et al., 2009 ▸).
| [Tl(C3H3N4O3)] | |
| Monoclinic, | Mo |
| Cell parameters from 216 reflections | |
| θ = 4.4–22.3° | |
| µ = 25.30 mm−1 | |
| β = 95.808 (4)° | |
| Block, clear colourless | |
| 0.2 × 0.2 × 0.2 mm |
| Agilent Xcalibur Sapphire3 CCD diffractometer | 1320 reflections with |
| ω scans | |
| Absorption correction: multi-scan ( | θmax = 27.5°, θmin = 3.0° |
| 4634 measured reflections | |
| 1452 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 1452 reflections | Δρmax = 6.17 e Å−3 |
| 100 parameters | Δρmin = −2.23 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Tl1 | 0.05880 (4) | 0.45183 (11) | 0.86058 (2) | 0.03141 (19) | |
| O2 | 0.1164 (7) | 0.4279 (17) | 0.7187 (4) | 0.0298 (15) | |
| O1 | 0.2851 (8) | 0.0779 (19) | 0.8210 (4) | 0.0339 (17) | |
| O3 | 0.2375 (8) | 0.4924 (18) | 0.4946 (5) | 0.0339 (17) | |
| N2 | 0.1809 (10) | 0.510 (2) | 0.5642 (6) | 0.0299 (19) | |
| N1 | 0.3245 (8) | 0.148 (2) | 0.7450 (4) | 0.0301 (17) | |
| C1 | 0.2298 (9) | 0.319 (2) | 0.7013 (5) | 0.0257 (18) | |
| N4 | 0.4966 (9) | 0.110 (2) | 0.6207 (5) | 0.0339 (19) | |
| H4A | 0.528766 | −0.041040 | 0.583376 | 0.041* | |
| H4B | 0.482666 | 0.024160 | 0.675476 | 0.041* | |
| N3 | 0.3648 (8) | 0.328 (2) | 0.5070 (4) | 0.0332 (18) | |
| C2 | 0.2653 (9) | 0.367 (3) | 0.6185 (5) | 0.0267 (18) | |
| C3 | 0.3828 (9) | 0.254 (2) | 0.5839 (5) | 0.0243 (17) |
| Tl1 | 0.0281 (3) | 0.0419 (3) | 0.0240 (3) | 0.00530 (14) | 0.00185 (18) | −0.00084 (13) |
| O2 | 0.019 (3) | 0.047 (4) | 0.024 (3) | 0.002 (3) | 0.004 (3) | −0.002 (3) |
| O1 | 0.026 (4) | 0.053 (4) | 0.023 (4) | 0.001 (3) | 0.004 (3) | 0.006 (3) |
| O3 | 0.030 (4) | 0.049 (4) | 0.023 (4) | 0.001 (3) | 0.002 (3) | 0.003 (3) |
| N2 | 0.028 (5) | 0.040 (4) | 0.022 (4) | 0.004 (3) | 0.003 (4) | 0.003 (3) |
| N1 | 0.027 (4) | 0.041 (4) | 0.023 (4) | 0.005 (4) | 0.005 (3) | 0.002 (3) |
| C1 | 0.032 (5) | 0.024 (4) | 0.022 (4) | −0.002 (4) | 0.003 (4) | −0.004 (3) |
| N4 | 0.031 (5) | 0.044 (5) | 0.029 (4) | 0.008 (4) | 0.011 (4) | −0.001 (4) |
| N3 | 0.028 (4) | 0.042 (5) | 0.028 (4) | 0.009 (4) | 0.000 (3) | 0.002 (4) |
| C2 | 0.020 (4) | 0.029 (4) | 0.030 (5) | −0.002 (4) | −0.001 (4) | −0.005 (4) |
| C3 | 0.023 (4) | 0.030 (4) | 0.020 (4) | −0.004 (3) | 0.000 (3) | −0.006 (3) |
| Tl1—O2 | 2.537 (7) | O1—N1 | 1.412 (9) |
| Tl1—O2i | 2.761 (7) | O3—N2 | 1.365 (11) |
| Tl1—O1 | 2.814 (7) | O3—N3 | 1.419 (11) |
| Tl1—O2ii | 2.880 (7) | N2—C2 | 1.304 (14) |
| Tl1—O3iii | 3.219 (8) | N1—C1 | 1.314 (12) |
| Tl1—N2ii | 3.289 (9) | C1—C2 | 1.497 (11) |
| Tl1—C1i | 3.291 (9) | N4—C3 | 1.360 (13) |
| Tl1—O1iv | 3.385 (7) | N4—H4A | 0.9324 |
| Tl1—C1 | 3.387 (8) | N4—H4B | 1.0077 |
| Tl1—O3v | 3.453 (8) | N3—C3 | 1.329 (11) |
| O2—C1 | 1.275 (11) | C2—C3 | 1.437 (11) |
| O2—Tl1—O2i | 75.9 (2) | N1—O1—Tl1vi | 124.6 (6) |
| O2—Tl1—O1 | 59.1 (2) | Tl1—O1—Tl1vi | 73.70 (15) |
| O2i—Tl1—O1 | 134.3 (2) | N1—O1—Tl1ii | 69.9 (5) |
| O2—Tl1—O2ii | 73.8 (2) | Tl1—O1—Tl1ii | 67.89 (16) |
| O2i—Tl1—O2ii | 83.2 (2) | Tl1vi—O1—Tl1ii | 64.47 (13) |
| O1—Tl1—O2ii | 91.3 (2) | N2—O3—N3 | 110.1 (8) |
| O2—Tl1—O3iii | 119.2 (2) | N2—O3—Tl1vii | 112.7 (6) |
| O2i—Tl1—O3iii | 164.3 (2) | N3—O3—Tl1vii | 108.2 (5) |
| O1—Tl1—O3iii | 60.21 (19) | N2—O3—Tl1viii | 107.8 (5) |
| O2ii—Tl1—O3iii | 104.50 (19) | N3—O3—Tl1viii | 139.7 (5) |
| O2—Tl1—O1iv | 67.2 (2) | Tl1vii—O3—Tl1viii | 68.20 (17) |
| O2i—Tl1—O1iv | 82.28 (19) | N2—O3—Tl1i | 29.7 (5) |
| O1—Tl1—O1iv | 73.70 (16) | N3—O3—Tl1i | 137.7 (5) |
| O2ii—Tl1—O1iv | 140.56 (18) | Tl1vii—O3—Tl1i | 103.6 (2) |
| O3iii—Tl1—O1iv | 99.15 (19) | Tl1viii—O3—Tl1i | 78.16 (14) |
| O2—Tl1—O3v | 119.6 (2) | N2—O3—Tl1ii | 36.6 (5) |
| O2i—Tl1—O3v | 101.3 (2) | N3—O3—Tl1ii | 111.1 (5) |
| O1—Tl1—O3v | 94.4 (2) | Tl1vii—O3—Tl1ii | 78.51 (15) |
| O2ii—Tl1—O3v | 166.55 (18) | Tl1viii—O3—Tl1ii | 107.4 (2) |
| O3iii—Tl1—O3v | 68.20 (17) | Tl1i—O3—Tl1ii | 49.53 (8) |
| O1iv—Tl1—O3v | 52.89 (17) | C2—N2—O3 | 107.0 (8) |
| Tl1—O2—Tl1ii | 106.8 (2) | C1—N1—O1 | 110.6 (7) |
| C1—O2—Tl1i | 129.1 (6) | O2—C1—N1 | 129.9 (8) |
| Tl1—O2—Tl1i | 103.4 (2) | O2—C1—C2 | 118.9 (9) |
| Tl1ii—O2—Tl1i | 83.2 (2) | N1—C1—C2 | 111.1 (7) |
| C1—O2—Tl1vi | 91.8 (5) | C3—N4—H4A | 105.2 |
| Tl1—O2—Tl1vi | 57.29 (13) | C3—N4—H4B | 111.1 |
| Tl1ii—O2—Tl1vi | 67.75 (13) | H4A—N4—H4B | 121.6 |
| Tl1i—O2—Tl1vi | 134.9 (2) | C3—N3—O3 | 105.6 (6) |
| C1—O2—Tl1iv | 123.5 (6) | N2—C2—C3 | 109.7 (8) |
| Tl1—O2—Tl1iv | 54.51 (12) | N2—C2—C1 | 120.8 (8) |
| Tl1ii—O2—Tl1iv | 133.3 (2) | C3—C2—C1 | 129.3 (9) |
| Tl1i—O2—Tl1iv | 64.69 (12) | N3—C3—N4 | 124.0 (7) |
| Tl1vi—O2—Tl1iv | 111.80 (14) | N3—C3—C2 | 107.6 (8) |
| N1—O1—Tl1 | 115.8 (5) | N4—C3—C2 | 128.3 (8) |
| N3—O3—N2—C2 | −0.1 (10) | Tl1vi—N1—C1—Tl1i | 74.4 (19) |
| Tl1vii—O3—N2—C2 | 120.8 (7) | O1—N1—C1—Tl1vi | −38.2 (6) |
| Tl1viii—O3—N2—C2 | −166.0 (6) | Tl1—N1—C1—Tl1vi | −48.4 (2) |
| Tl1i—O3—N2—C2 | −161.9 (14) | Tl1ii—N1—C1—Tl1vi | 29.4 (5) |
| Tl1ii—O3—N2—C2 | 98.6 (9) | N2—O3—N3—C3 | −0.6 (10) |
| N3—O3—N2—Tl1i | 161.8 (7) | Tl1vii—O3—N3—C3 | −124.1 (6) |
| Tl1vii—O3—N2—Tl1i | −77.3 (8) | Tl1viii—O3—N3—C3 | 158.3 (6) |
| Tl1viii—O3—N2—Tl1i | −4.1 (10) | Tl1i—O3—N3—C3 | 12.7 (11) |
| Tl1ii—O3—N2—Tl1i | −99.5 (12) | Tl1ii—O3—N3—C3 | −39.7 (8) |
| N3—O3—N2—Tl1ii | −98.7 (9) | N2—O3—N3—Tl1vii | 123.5 (7) |
| Tl1vii—O3—N2—Tl1ii | 22.2 (9) | Tl1viii—O3—N3—Tl1vii | −77.5 (7) |
| Tl1viii—O3—N2—Tl1ii | 95.4 (6) | Tl1i—O3—N3—Tl1vii | 136.8 (8) |
| Tl1i—O3—N2—Tl1ii | 99.5 (12) | Tl1ii—O3—N3—Tl1vii | 84.4 (3) |
| N3—O3—N2—Tl1vii | −120.9 (7) | N2—O3—N3—Tl1viii | −158.9 (12) |
| Tl1viii—O3—N2—Tl1vii | 73.2 (4) | Tl1vii—O3—N3—Tl1viii | 77.5 (7) |
| Tl1i—O3—N2—Tl1vii | 77.3 (8) | Tl1i—O3—N3—Tl1viii | −145.6 (13) |
| Tl1ii—O3—N2—Tl1vii | −22.2 (9) | Tl1ii—O3—N3—Tl1viii | 161.9 (10) |
| N3—O3—N2—Tl1viii | 165.9 (8) | O3—N2—C2—C3 | 0.7 (11) |
| Tl1vii—O3—N2—Tl1viii | −73.2 (4) | Tl1i—N2—C2—C3 | −166.4 (6) |
| Tl1i—O3—N2—Tl1viii | 4.1 (10) | Tl1ii—N2—C2—C3 | 131.4 (7) |
| Tl1ii—O3—N2—Tl1viii | −95.4 (6) | Tl1vii—N2—C2—C3 | 52.0 (10) |
| Tl1—O1—N1—C1 | −13.7 (9) | Tl1viii—N2—C2—C3 | −29 (2) |
| Tl1vi—O1—N1—C1 | 73.8 (9) | O3—N2—C2—C1 | −175.4 (8) |
| Tl1ii—O1—N1—C1 | 37.9 (6) | Tl1i—N2—C2—C1 | 17.5 (11) |
| Tl1vi—O1—N1—Tl1 | 87.4 (6) | Tl1ii—N2—C2—C1 | −44.7 (8) |
| Tl1ii—O1—N1—Tl1 | 51.6 (4) | Tl1vii—N2—C2—C1 | −124.2 (7) |
| Tl1—O1—N1—Tl1ii | −51.6 (4) | Tl1viii—N2—C2—C1 | 154.6 (11) |
| Tl1vi—O1—N1—Tl1ii | 35.9 (5) | O3—N2—C2—Tl1ii | −130.7 (7) |
| Tl1—O1—N1—Tl1vi | −87.4 (6) | Tl1i—N2—C2—Tl1ii | 62.2 (4) |
| Tl1ii—O1—N1—Tl1vi | −35.9 (5) | Tl1vii—N2—C2—Tl1ii | −79.4 (5) |
| Tl1—O2—C1—N1 | 13.2 (13) | Tl1viii—N2—C2—Tl1ii | −160.6 (16) |
| Tl1ii—O2—C1—N1 | −106.2 (10) | O3—N2—C2—Tl1i | 167.1 (9) |
| Tl1i—O2—C1—N1 | 162.0 (7) | Tl1ii—N2—C2—Tl1i | −62.2 (4) |
| Tl1vi—O2—C1—N1 | −38.7 (10) | Tl1vii—N2—C2—Tl1i | −141.7 (8) |
| Tl1iv—O2—C1—N1 | 79.1 (11) | Tl1viii—N2—C2—Tl1i | 137.1 (18) |
| Tl1—O2—C1—C2 | −170.2 (6) | O2—C1—C2—N2 | −1.5 (14) |
| Tl1ii—O2—C1—C2 | 70.4 (8) | N1—C1—C2—N2 | 175.7 (9) |
| Tl1i—O2—C1—C2 | −21.4 (12) | Tl1ii—C1—C2—N2 | 48.9 (9) |
| Tl1vi—O2—C1—C2 | 137.9 (7) | Tl1—C1—C2—N2 | −18 (2) |
| Tl1iv—O2—C1—C2 | −104.3 (8) | Tl1i—C1—C2—N2 | −13.9 (9) |
| Tl1—O2—C1—Tl1ii | 119.5 (6) | Tl1vi—C1—C2—N2 | 95.3 (11) |
| Tl1i—O2—C1—Tl1ii | −91.7 (7) | O2—C1—C2—C3 | −176.8 (9) |
| Tl1vi—O2—C1—Tl1ii | 67.6 (2) | N1—C1—C2—C3 | 0.4 (14) |
| Tl1iv—O2—C1—Tl1ii | −174.7 (6) | Tl1ii—C1—C2—C3 | −126.4 (9) |
| Tl1ii—O2—C1—Tl1 | −119.5 (6) | Tl1—C1—C2—C3 | 166.8 (11) |
| Tl1i—O2—C1—Tl1 | 148.8 (10) | Tl1i—C1—C2—C3 | 170.8 (10) |
| Tl1vi—O2—C1—Tl1 | −51.9 (4) | Tl1vi—C1—C2—C3 | −80.0 (13) |
| Tl1iv—O2—C1—Tl1 | 65.8 (5) | O2—C1—C2—Tl1ii | −50.4 (7) |
| Tl1—O2—C1—Tl1i | −148.8 (10) | N1—C1—C2—Tl1ii | 126.8 (8) |
| Tl1ii—O2—C1—Tl1i | 91.7 (7) | Tl1—C1—C2—Tl1ii | −66.7 (14) |
| Tl1vi—O2—C1—Tl1i | 159.3 (7) | Tl1i—C1—C2—Tl1ii | −62.78 (17) |
| Tl1iv—O2—C1—Tl1i | −82.9 (6) | Tl1vi—C1—C2—Tl1ii | 46.4 (7) |
| Tl1—O2—C1—Tl1vi | 51.9 (4) | O2—C1—C2—Tl1i | 12.4 (7) |
| Tl1ii—O2—C1—Tl1vi | −67.6 (2) | N1—C1—C2—Tl1i | −170.4 (8) |
| Tl1i—O2—C1—Tl1vi | −159.3 (7) | Tl1ii—C1—C2—Tl1i | 62.78 (17) |
| Tl1iv—O2—C1—Tl1vi | 117.8 (5) | Tl1—C1—C2—Tl1i | −3.9 (14) |
| O1—N1—C1—O2 | 1.8 (14) | Tl1vi—C1—C2—Tl1i | 109.2 (8) |
| Tl1—N1—C1—O2 | −8.4 (9) | O3—N3—C3—N4 | −176.4 (8) |
| Tl1ii—N1—C1—O2 | 69.4 (9) | Tl1vii—N3—C3—N4 | 130.2 (8) |
| Tl1vi—N1—C1—O2 | 40.0 (11) | Tl1viii—N3—C3—N4 | −162.5 (7) |
| O1—N1—C1—C2 | −175.0 (8) | O3—N3—C3—C2 | 1.0 (10) |
| Tl1—N1—C1—C2 | 174.8 (8) | Tl1vii—N3—C3—C2 | −52.4 (10) |
| Tl1ii—N1—C1—C2 | −107.4 (9) | Tl1viii—N3—C3—C2 | 14.8 (11) |
| Tl1vi—N1—C1—C2 | −136.8 (6) | Tl1ix—N4—C3—N3 | 29.1 (18) |
| O1—N1—C1—Tl1ii | −67.6 (9) | Tl1ix—N4—C3—C2 | −147.8 (9) |
| Tl1—N1—C1—Tl1ii | −77.8 (4) | N2—C2—C3—N3 | −1.1 (11) |
| Tl1vi—N1—C1—Tl1ii | −29.4 (5) | C1—C2—C3—N3 | 174.6 (9) |
| O1—N1—C1—Tl1 | 10.2 (7) | Tl1ii—C2—C3—N3 | 85.0 (10) |
| Tl1ii—N1—C1—Tl1 | 77.8 (4) | Tl1i—C2—C3—N3 | −27.9 (19) |
| Tl1vi—N1—C1—Tl1 | 48.4 (2) | N2—C2—C3—N4 | 176.1 (9) |
| O1—N1—C1—Tl1i | 36 (2) | C1—C2—C3—N4 | −8.2 (16) |
| Tl1—N1—C1—Tl1i | 26.0 (17) | Tl1ii—C2—C3—N4 | −97.8 (11) |
| Tl1ii—N1—C1—Tl1i | 103.8 (19) | Tl1i—C2—C3—N4 | 149.3 (12) |
| H··· | ||||
| N4—H4 | 0.93 | 2.23 | 3.156 (10) | 169 |
| N4—H4 | 1.01 | 2.65 | 3.256 (13) | 118 |