| Literature DB >> 32148108 |
Xiu-Jiang Du1, Xing-Jie Peng1, Rui-Qi Zhao1, Wei-Guang Zhao1, Wei-Li Dong2, Xing-Hai Liu3.
Abstract
Thirty-six novel threoninamide carbamate derivatives were designed and synthesised using active fragment-based pharmacophore model. Antifungal activities of these compounds were tested against Oomycete fungi Phytophthora capsici in vitro and in vivo. Interestingly, compound I-1, I-2, I-3, I-6 and I-7 exhibited moderate control effect (>50%) against Pseudoperonospora cubensis in greenhouse at 6.25 μg/mL, which is better than that of control. Meanwhile most of these compounds exhibited significant inhibitory against P. capsici. The other nine fungi were also tested. More importantly, some compounds exhibited remarkably high activities against Sclerotinia sclerotiorum, P. piricola and R. solan in vitro with EC50 values of 3.74-9.76 μg/mL. It is possible that the model is reliabile and this method can be used to discover lead compounds for the development of fungicides.Entities:
Keywords: Pharmacophore model; SAR; antifungal activity; synthesis; threoninamide carbamate derivatives
Mesh:
Substances:
Year: 2020 PMID: 32148108 PMCID: PMC7144198 DOI: 10.1080/14756366.2020.1729144
Source DB: PubMed Journal: J Enzyme Inhib Med Chem ISSN: 1475-6366 Impact factor: 5.051
Figure 1.The pharmacophore model of three active fragments.
Figure 2.The three structures of designed threonine derivatives.
Scheme 1.The synthetic route of threonine derivatives.
Scheme 2.The general synthesis procedure of intermediate amine.
The EC50 values of threonine derivatives against P. capsici.
| No. | Substituents | EC50 μg/mL | ||||
|---|---|---|---|---|---|---|
| R1 | R2 | R3 | ||||
| H | Bn | Me | 0.9428 | 2.07 ± 0.23 | ||
| Bn | Me | 0.9732 | 3.01 ± 0.26 | |||
| Bn | Me | 0.9324 | 1.39 ± 0.12 | |||
| Bn | Me | 0.9712 | 7.27 ± 0.55 | |||
| Bn | Me | 0.8993 | 1.24 ± 0.09 | |||
| Bn | Me | 0.9642 | 2.05 ± 0.24 | |||
| Bn | Me | 0.9842 | 0.80 ± 0.05 | |||
| Bn | Me | 0.9701 | 6.26 ± 0.67 | |||
| Bn | Me | 0.9971 | 4.98 ± 0.88 | |||
| Bn | Me | 0.9666 | 0.46 ± 0.03 | |||
| 3,4-diMeO | Bn | Me | 0.6145 | 0.56 ± 0.03 | ||
| 3-MeO-4-Pgoxy | Bn | Me | 0.9365 | 0.27 ± 0.16 | ||
| 3,4-diMeO | Bn | Ph | 0.9941 | 42.06 ± 10.83 | ||
| 3,4-diMeO | Bn | 0.9967 | 37.05 ± 5.44 | |||
| 3,4-diMeO | Bn | 0.9537 | 36.63 ± 7.32 | |||
| 3,4-diMeO | Bn | 0.9909 | 24.78 ± 2.99 | |||
| 3,4-diMeO | Bn | 0.9286 | 8.88 ± 1.32 | |||
| 3,4-diMeOBn | Me | 0.9477 | 2.31 ± 0.19 | |||
| 3,4-diMeOBn | Me | 0.9186 | 3.49 ± 0.55 | |||
| 3,4-diMeOBn | Me | 0.9868 | 2.80 ± 0.32 | |||
| 3,4-diMeOBn | Me | 0.9478 | 4.63 ± 0.68 | |||
| Me | 0.9436 | 0.48 ± 0.03 | ||||
| Me | 0.9855 | 0.49 ± 0.03 | ||||
| Me | 0.7882 | 0.14 ± 0.02 | ||||
| 3,4-diMeO | Me | 0.9198 | 0.81 ± 0.03 | |||
| 3-MeO-4-Pgoxy | Me | 0.9404 | 0.85 ± 0.05 | |||
| 3-MeO-4-Pgoxy | Me | 0.9826 | 2.64 ± 0.32 | |||
| Me | 0.9975 | 7.93 ± 2.37 | ||||
| Me | 0.9841 | 6.99 ± 1.30 | ||||
| Me | 0.9913 | 1.59 ± 0.12 | ||||
| Me | 0.9967 | 1.26 ± 0.08 | ||||
| 3-MeO-4-Pgoxy | Me | 0.9867 | 1.77 ± 0.06 | |||
| Me | 0.9974 | 6.72 ± 0.88 | ||||
| Me | 0.9842 | 9.29 ± 1.06 | ||||
| 3,4-diMeO | Me | 0.9695 | 3.10 ± 0.23 | |||
| 3-MeO-4-Pgoxy | Me | 0.9910 | 1.23 ± 0.30 | |||
| dimethomorph | 0.9930 | 0.37 ± 0.03 | ||||
The in vivo fungicidal activity against two fungi of some compounds.
| No. | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| 50 | 25 | 12.5 | 6.25 | 3.125 | 50 | 25 | 12.5 | 6.25 | |
| 100 ± 0 | 100 ± 0 | 47.8 ± 2.3 | 42.6 ± 1.6 | 30.4 ± 1.5 | 83.4 ± 1.5 | 63.5 ± 3.2 | 47.0 ± 2.3 | 40.3 ± 2.4 | |
| 87.2 ± 1.3 | 53.2 ± 1.4 | 40.4 ± 1.6 | 36.2 ± 3.1 | 14.9 ± 2.1 | 96.7 ± 0.8 | 90.1 ± 1.5 | 73.5 ± 5.2 | 66.9 ± 3.3 | |
| 100 ± 0 | 83.0 ± 0.9 | 66.0 ± 2.8 | 27.7 ± 2.5 | 14.9 ± 3.3 | 86.7 ± 3.2 | 66.9 ± 4.2 | 60.2 ± 4.4 | 60.2 ± 5.1 | |
| 100 ± 0 | 61.7 ± 2.5 | 40.4 ± 3.4 | 66.0 ± 3.1 | 48.9 ± 5.2 | 90.1 ± 1.1 | 73.5 ± 3.3 | 66.9 ± 3.1 | 53.6 ± 2.1 | |
| 83.0 ± 1.9 | 78.7 ± 3.6 | 74.5 ± 2.3 | 53.2 ± 1.6 | nt | 76.8 ± 4.2 | 66.9 ± 2.1 | 53.6 ± 6.8 | 47.0 ± 5.2 | |
| 65.2 ± 4.6 | 65.2 ± 1.3 | 52.2 ± 3.9 | 30.4 ± 2.1 | nt | 73.9 ± 6.5 | 63.8 ± 1.5 | 52.7 ± 7.2 | 36.0 ± 1.8 | |
| 69.6 ± 2.1 | 65.2 ± 0.5 | 30.4 ± 2.2 | nt | nt | 66.9 ± 2.2 | 58.2 ± 2.6 | 47.1 ± 2.5 | 39.7 ± 9.4 | |
| 83.6 ± 3.2 | 68.2 ± 2.2 | 63.6 ± 1.5 | 45.5 ± 1.8 | 0 | 76.4 ± 1.3 | 62.8 ± 4.2 | 69.0 ± 4.2 | 55.0 ± 2.3 | |
| dimethomorph | 100 ± 0 | 100 ± 0 | 100 ± 0 | 87.0 ± 2.1 | 62.5 ± 1.2 | 74.2 ± 2.5 | 69.0 ± 2.1 | 61.3 ± 2.5 | 46.9 ± 4.1 |
The in vitro fungicidal activity of compound at 50 μg/mL.
| No. | FO | CA | PP | AS | GZ | PI | SS | BC | RS |
|---|---|---|---|---|---|---|---|---|---|
| I-1 | 18.2 ± 1.9 | 36.8 ± 2.2 | 81.4 ± 2.1 | 72.4 ± 1.6 | nt | 52.5 ± 2.6 | 87.0 ± 2.2 | 69.2 ± 2.5 | 90.8 ± 2.2 |
| I-2 | 45.0 ± 2.1 | 45.5 ± 3.2 | 90.5 ± 0.9 | 62.5 ± 0.8 | 36.4 ± 1.6 | 53.3 ± 2.4 | 86.4 ± 1.6 | 66.7 ± 1.5 | 76.3 ± 3.1 |
| I-3 | 13.6 ± 1.2 | 26.3 ± 1.7 | 43.0 ± 3.2 | 79.3 ± 1.8 | nt | 52.5 ± 1.7 | 82.6 ± 1.9 | 65.4 ± 4.1 | 81.5 ± 1.5 |
| I-6 | 27.3 ± 1.7 | 52.6 ± 3.6 | 70.9 ± 2.4 | 62.1 ± 2.4 | nt | 52.5 ± 4.1 | 82.6 ± 2.8 | 71.2 ± 2.2 | 84.6 ± 2.2 |
| I-7 | 18.2 ± 1.9 | 52.6 ± 2.7 | 76.7 ± 0.5 | 75.9 ± 1.5 | nt | 45.0 ± 3.3 | 87.0 ± 3.1 | 71.2 ± 1.4 | 90.8 ± 1.5 |
| I-8 | 22.7 ± 0.3 | 47.4 ± 3.4 | 53.5 ± 1.4 | 75.9 ± 0.4 | nt | 50.0 ± 2.8 | 84.8 ± 2.1 | 67.3 ± 2.1 | 83.1 ± 1.7 |
| I-9 | 18.2 ± 0.6 | 26.3 ± 2.3 | 69.8 ± 3.2 | 65.5 ± 3.2 | nt | 50.0 ± 1.9 | 89.1 ± 1.9 | 73.1 ± 5.1 | 89.2 ± 1.5 |
| I-10 | 38.1 ± 3.1 | 57.9 ± 3.1 | 57.1 ± 4.1 | 57.1 ± 2.2 | 41.2 ± 1.7 | 52.6 ± 1.4 | 96.8 ± 3.2 | 80.4 ± 1.5 | 91.1 ± 2.1 |
| I-14 | 40.0 ± 5.8 | 36.4 ± 2.5 | 66.7 ± 2.4 | 56.3 ± 1.7 | 27.3 ± 3.1 | 46.7 ± 3.5 | 86.4 ± 2.2 | 69.2 ± 2.4 | 65.8 ± 1.7 |
| I-15 | 40.0 ± 3.6 | 27.3 ± 1.3 | 76.2 ± 3.1 | 43.8 ± 2.4 | 27.3 ± 2.8 | 33.3 ± 4.2 | 90.9 ± 1.5 | 69.2 ± 3.1 | 81.6 ± 2.1 |
| I-16 | 45.0 ± 2.2 | 27.3 ± 1.0 | 52.4 ± 2.5 | 56.3 ± 3.1 | 31.8 ± 2.5 | 46.7 ± 4.4 | 90.9 ± 0.9 | 56.4 ± 0.9 | 72.4 ± 2.2 |
| I-17 | 33.3 ± 1.7 | 29.4 ± 2.1 | 83.3 ± 1.3 | 52.6 ± 2.6 | 66.7 ± 4.1 | 43.5 ± 2.3 | 83.8 ± 1.7 | 55.2 ± 3.1 | 62.5 ± 7.2 |
| I-18 | 68.8 ± 4.1 | 76.9 ± 4.5 | 84.0 ± 2.1 | 55.6 ± 1.9 | 23.5 ± 2.3 | 44.4 ± 3.3 | 90.3 ± 2.2 | 67.9 ± 4.1 | 90.3 ± 1.2 |
| I-21 | 38.5 ± 2.6 | 58.8 ± 2.3 | 95.5 ± 0.7 | 73.7 ± 2.5 | 60.0 ± 1.9 | 44.0 ± 1.5 | 88.6 ± 1.5 | 74.4 ± 2.2 | 88.2 ± 1.4 |
| I-23 | 42.3 ± 2.2 | 35.3 ± 2.5 | 100 ± 0 | 63.2 ± 1.5 | 60.0 ± 2.1 | 44.0 ± 2.1 | 79.5 ± 3.2 | 81.4 ± 1.6 | 84.3 ± 1.5 |
| I-33 | 62.5 ± 1.8 | 76.9 ± 2.1 | 92.0 ± 1.4 | 72.7 ± 1.4 | 47.1 ± 1.3 | 50.0 ± 3.7 | 90.3 ± 1.2 | 64.3 ± 1.9 | 77.6 ± 2.3 |
| Chlorothalonil | 83.3 ± 0.4 | 75.0 ± 1.3 | 92.3 ± 0.3 | 73.9 ± 0.7 | 73.1 ± 0.4 | 81.0 ± 2.5 | 96.4 ± 0.5 | 96.1 ± 0.3 | 96.1 ± 0.7 |
| Carbendazim | 100 ± 0 | 8.3 ± 1.2 | 97.4 ± 0.5 | 43.5 ± 4.2 | 100 ± 0 | 100 ± 0 | 100 ± 0 | 9.8 ± 2.3 | 100 ± 0 |
“nt”: not test.
The EC50 of some compounds against three fungals (μg/mL).
| No | |||
|---|---|---|---|
| I-10 | nt | 4.00 ± 0.7 | nt |
| I-18 | nt | 9.04 ± 1.5 | 9.49 ± 1.2 |
| I-21 | 4.19 ± 0.3 | 8.80 ± 1.2 | nt |
| I-23 | 7.01 ± 1.1 | nt | nt |
| I-33 | 3.74 ± 1.6 | 9.76 ± 1.9 | nt |
| Chlorothalonil | 7.33 ± 0.4 | 5.78 ± 0.8 | 1.67 ± 0.2 |
nt: not test.