| Literature DB >> 32141425 |
Wei Wang, Jean Artois, Xiling Wang, Adam J Kucharski, Yao Pei, Xin Tong, Victor Virlogeux, Peng Wu, Benjamin J Cowling, Marius Gilbert, Hongjie Yu.
Abstract
Various interventions for live poultry markets (LPMs) have emerged to control outbreaks of avian influenza A(H7N9) virus in mainland China since March 2013. We assessed the effectiveness of various LPM interventions in reducing transmission of H7N9 virus across 5 annual waves during 2013-2018, especially in the final wave. With the exception of waves 1 and 4, various LPM interventions reduced daily incidence rates significantly across waves. Four LPM interventions led to a mean reduction of 34%-98% in the daily number of infections in wave 5. Of these, permanent closure provided the most effective reduction in human infection with H7N9 virus, followed by long-period, short-period, and recursive closures in wave 5. The effectiveness of various LPM interventions changed with the type of intervention across epidemics. Permanent LPM closure should be considered to maintain sufficient effectiveness of interventions and prevent the recurrence of H7N9 epidemics.Entities:
Keywords: China; avian influenza; effectiveness assessment; influenza; influenza A(H7N9); influenza in humans; live poultry markets; viruses; zoonoses
Mesh:
Year: 2020 PMID: 32141425 PMCID: PMC7181931 DOI: 10.3201/eid2605.190390
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Figure 1Mean daily incidence rates in counties with and without live poultry market closures across waves of influenza A(H7N9) infections, China, 2013–2017. A) Wave 1; B) wave 2; C) wave 3; D) wave 4; E) wave 5. Wave-specific calculations include only counties with >1 human case in that wave. Error bars indicate 95% CIs. Numbers below the axis represent the number of counties with and without LPM live poultry market closure at corresponding intervals; pie charts represents the proportion of counties with live poultry market closures at corresponding intervals. The timespan in the last interval was equal to the period from the end of the former interval to the date of infection of the last case in each wave.
Figure 2Estimated daily incidence rates in counties with various levels of live poultry market closures across waves of influenza A(H7N9) infections, by duration of closure, China, 2013–2017. A) Wave 1; B) wave 2; C) wave 3; D) wave 4; E) wave 5. Error bars indicate 95% CIs. Asterisks (*) above bars indicate statistically significant (p<0.05) differences between daily incidence rates and reference category (Ref.) rates. Duration categories: no closure during epidemic wave; permanent closure, permanently closed within the epidemic wave or for the entire epidemic wave duration; long-period closure (>14 days within the epidemic wave [,]); short-period closure (<14 days within the epidemic wave); and recursive closure, whereby LPMs were closed for 1 or 2 day with a repetition of the closing over time (the closing might be implemented weekly, biweekly, or monthly).
Figure 3Estimated daily incidence rates in counties with various levels of live poultry market (LPM) closures across waves of influenza A(H7N9) infections, by proportion of closure days during epidemic wave, China, 2013–2017. A) Wave 1; B) wave 2; C) wave 3; D) wave 4; E) wave 5. Error bars indicate 95% CIs. Asterisks (*) above bars indicate statistically significant (p<0.05) differences between daily incidence rates and reference category (Ref.) rates. Proportion categories: no closure; before closure, incidence rate before market was closed; <25%, closed <25% of the days of the wave duration; 25%–75%, closed 25%–75% of the days of the wave duration; >75%, closed >75% of the days of the wave duration.
Characteristics of study sites in the 2016–17 epidemic wave of influenza A(H7N9), China.
| Province | City | District/county, n = 60 | Site no., n = 17 | No. cases | Type of LPM closure | LPM closures | ||
|---|---|---|---|---|---|---|---|---|
| Urban | Semiurban | Start date | End date | |||||
| Jiangsu | Suzhou | Gusu District | 1 | 19 | 1 | Permanent | 2016 Dec 31 | Unreported |
| Huqiu District, Wujiang District, Wuzhong District, Xiangcheng District | 2 | 12 | 6 | Long-period | 2016 Dec 27 | Unreported | ||
| Kunshan City | 3 | 5 | 1 | Long-period | 2016 Dec 19 | Unreported | ||
| Wuxi | Xishan District, Binhu District, Huishan District, Liangxi District (Chongan District, Nanchang District, Beitang District), Xinwu District, Jiangyin City | 4 | 9 | 8 | Long-period | 2016 Dec 29 | 2017 Apr 27 | |
| Changzhou | Zhonglou District, Tianning District, Wujin District, Xinbei District, Jintan City, Liyang City | 5 | 8 | 4 | Long-period | 2016 Dec 30 | 2017 Apr 30 | |
|
| Nantong | Chongchuan District | 6 | 5 | 0 | Long-period | 2017 Feb 25 | Unreported |
| Guangdong | Guangzhou | Haizhu District, Tianhe District, Panyu District, Baiyun District | 7 | 5 | 3 | Recursive | 2017 Jan 1 | 2017 Feb 15 |
| 7 | Short-period | 2017 Feb 16 | 2017 Feb 28 | |||||
|
| Foshan | Nanhai District, Shunde District | 8 | 1 | 4 | Short-period | 2017 Jan 16 | 2017 Jan 25 |
| Zhejiang | Ningbo | Yuyao City, Cixi City, Fenghua City, Ninghai County | 9 | 1 | 8 | Long-period | 2017 Feb 11 | Unreported |
| Hangzhou | Yuhang District, Xiaoshan District, Linan City, Fuyang City, Chunan County | 10 | 2 | 5 | Long-period | 2017 Feb 11 | Unreported | |
| Wenzhou | Dongtou District, Yueqing City, Ruian County, Cangnan County | 11 | 1 | 4 | Long-period | 2017 Feb 11 | Unreported | |
|
| Lishui | Suichang County, Jingning County, Jinyun County, Qingyuan County | 12 | 0 | 5 | Long-period | 2017 Feb 11 | Unreported |
| Hunan | Xiangtan | Yuetang District, Yuhu District, Xiangtan County | 13 | 3 | 2 | Long-period | 2017 Jan 24 | Unreported |
| Anhui | Suzhou City | Yongqiao District | 14 | 5 | 0 | Long-period | 2017 Feb 15 | 2017 Apr 30 |
| Fujian | Fuzhou | Jinan District, Gulou District, Taijiang District | 15 | 5 | 0 | Short-period | 2017 Feb 7 | 2017 Feb 17 |
| Sichuan | Aba | Jinchuan County, Ruoergai County, Xiaojin County | 16 | 0 | 5 | Recursive | 2017 May 10 | Unreported |
| Shanghai | Shanghai | Chongming District, Fengxian District, Jiading District, Jingan District, Jinshan District | 17 | 2 | 3 | Long-period | 2017 Jan 28 | 2017 Apr 30 |
*Unreported indicates that the end of the LPM closure was not observed before May 31, 2017. LPM, live poultry market.
Parameter estimation of infection rates before and after live poultry market closures in the 2016–17 influenza A(H7N9) epidemic wave, China.
| Site no. | Type of closure | Expected daily no. infections (95% CI) | Reduction in no. infections after closure, % (95% CI) | Reproduction number (95% CI) | |
|---|---|---|---|---|---|
| Before closure | After closure | ||||
| 1 | Permanent | 0.230 (0.121–0.372) | 0.006 (0.000–0.023) | 97.0 (94.0–100.0) | 0.147 (0.034–0.285) |
| 2 | Long | 0.340 (0.171–0.540) | 0.034 (0.009–0.073) | 90.0 (87.0–95.0) | |
| 3 | Long | 0.120 (0.037–0.248) | 0.010 (0.000–0.033) | 92.0 (87.0–100.0) | |
| 4 | Long | 0.390 (0.183–0.648) | 0.018 (0.000–0.064) | 95.0 (90.0–100.0) | |
| 5 | Long | 0.460 (0.231–0.763) | 0.008 (0.000–0.033) | 98.0 (96.0–100.0) | |
| 6 | Long | 0.040 (0.014–0.089) | 0.022 (0.003–0.058) | 48.0 (35.0–81.0) | |
| 7 | Recursive | 0.162 (0.037–0.229) | 0.107 (0.012–0.301) | 34.0 (15.0–70.0) | |
| 7 | Short | 0.107 (0.012–0.301) | 0.029 (0.005–0.068) | 73.0 (53.0–77.0) | |
| 8 | Short | 0.190 (0.062–0.379) | 0.008 (0.000–0.028) | 96.0 (93.0–99.0) | |
| 9 | Long | 0.120 (0.050–0.220) | 0.019 (0.002–0.055) | 84.0 (75.0–96.0) | |
| 10 | Long | 0.090 (0.032–0.176) | 0.001 (0.000–0.035) | 89.0 (80.0–99.0) | |
| 11 | Long | 0.110 (0.037–0.229) | 0.009 (0.000–0.035) | 92.0 (84.0–99.0) | |
| 12 | Long | 0.090 (0.029–0.193) | 0.020 (0.002–0.054) | 78.0 (72.0–92.0) | |
| 13 | Long | 0.220 (0.048–0.518) | 0.031 (0.008–0.069) | 86.0 (83.0–87.0) | |
| 14 | Long | 0.190 (0.066–0.374) | 0.016 (0.000–0.052) | 92.0 (86.0–100.0) | |
| 15 | Short | 0.350 (0.117–0.728) | 0.019 (0.002–0.055) | 95.0 (92.0–98.0) | |
| 16 | Recursive | 0.210 (0.068–0.400) | 0.060 (0.002–0.211) | 71.0 (47.0–97.0) | |
| 17 | Long | 0.140 (0.044–0.295) | 0.022 (0.003–0.062) | 84.0 (79.0–94.0) | |
Estimates of the net effect of LPM closures by comparing the reductions in the number of influenza A(H7N9) infections between study sites with and without closures, adjusting for similar season pattern of absolute humidity, China*
| Study sites with LPM interventions | Reduction in no. infections, % (95% CI) | |||||||
|---|---|---|---|---|---|---|---|---|
| Reference sites without LPM interventions | Study sites with LPM interventions, R1 | Reference sites without LPM interventions, R2 | Difference in reduction, R1 – R2 | p value | ||||
| Site no. | Province | Cities | ||||||
| Site 1 | 1 | Jiangsu | Huaian (Huaian District, Qingpu District), Nantong (Haimen City, Rugao City), Xuzhou (Suining County), Yancheng (Dongtai City), Yangzhou (Hanjiang District) | 97.0 (93.0–100.0) | 52.0 (12.0–61.0) | 45.0 (32.0–88.0) | <0.001 | |
| Site 2 | 1 | 90.0 (88.0–94.0) | 57.0 (16.0–67.0) | 33.0 (21.0–78.0) | <0.001 | |||
| Site 3 | 1 | 90.0 (84.0–99.0) | 70.0 (42.0–76.0) | 20.0 (8.0–57.0) | <0.001 | |||
| Site 4 | 1 | 94.0 (89.0–99.0) | 49.0 (10.0–48.0) | 44.0 (30.0–89.0) | <0.001 | |||
| Site 5 | 1 | 98.0 (96.0–100.0) | 48.0 (20.0–58.0) | 51.0 (38.0–80.0) | <0.001 | |||
| Site 6 | 1 | 50.0 (32.0–74.0) | 32.0 (21.0–50.0) | 18.0 (10.0–23.0) | <0.001 | |||
| Site 14 | 1 | 93.0 (86.0–100.0) | 40.0 (27.0–63.0) | 52.0 (36.0–59.0) | <0.001 | |||
| Site 17 | 1 | 84.0 (78.0–94.0) | 46.0 (39.0–61.0) | 38.0 (33.0–39.0) | <0.001 | |||
| Site 13 | 2 | Hunan | Chenzhou (Beihu District, Yongxing County), Hengyang (Hengdong County, Shigu District, Zhuhui District), Loudi (Shuangfeng District), Shaoyang (Shaodong County, Xinning County, Xinshao County), Zhangjiajie (Yongding District) | 86.0 (81.0–87.0) | 85.0 (84.0–86.0) | 0.5 (−3.0 to 1.0) | 0.098 | |
*Similar seasonal patterns of absolute humidity had been observed among study sites with and without closures (e.g., study site 1–6, site 14, site 17, and reference site 1). LPM, live poultry market.