Literature DB >> 32140870

Conventional Filtering Versus U-Net Based Models for Pulmonary Nodule Segmentation in CT Images.

Joana Rocha1,2, António Cunha3,4, Ana Maria Mendonça5,3.   

Abstract

Lung cancer is considered one of the deadliest diseases in the world. An early and accurate diagnosis aims to promote the detection and characterization of pulmonary nodules, which is of vital importance to increase the patients' survival rates. The mentioned characterization is done through a segmentation process, facing several challenges due to the diversity in nodular shape, size, and texture, as well as the presence of adjacent structures. This paper tackles pulmonary nodule segmentation in computed tomography scans proposing three distinct methodologies. First, a conventional approach which applies the Sliding Band Filter (SBF) to estimate the filter's support points, matching the border coordinates. The remaining approaches are Deep Learning based, using the U-Net and a novel network called SegU-Net to achieve the same goal. Their performance is compared, as this work aims to identify the most promising tool to improve nodule characterization. All methodologies used 2653 nodules from the LIDC database, achieving a Dice score of 0.663, 0.830, and 0.823 for the SBF, U-Net and SegU-Net respectively. This way, the U-Net based models yield more identical results to the ground truth reference annotated by specialists, thus being a more reliable approach for the proposed exercise. The novel network revealed similar scores to the U-Net, while at the same time reducing computational cost and improving memory efficiency. Consequently, such study may contribute to the possible implementation of this model in a decision support system, assisting the physicians in establishing a reliable diagnosis of lung pathologies based on this segmentation task.

Entities:  

Keywords:  Computer-aided diagnosis; Conventional; Deep learning; Image analysis; Lung; Nodule; Segmentation

Mesh:

Year:  2020        PMID: 32140870     DOI: 10.1007/s10916-020-1541-9

Source DB:  PubMed          Journal:  J Med Syst        ISSN: 0148-5598            Impact factor:   4.460


  6 in total

1.  Optic disc segmentation using the sliding band filter.

Authors:  Behdad Dashtbozorg; Ana Maria Mendonça; Aurélio Campilho
Journal:  Comput Biol Med       Date:  2014-10-30       Impact factor: 4.589

Review 2.  Deep learning.

Authors:  Yann LeCun; Yoshua Bengio; Geoffrey Hinton
Journal:  Nature       Date:  2015-05-28       Impact factor: 49.962

3.  SegNet: A Deep Convolutional Encoder-Decoder Architecture for Image Segmentation.

Authors:  Vijay Badrinarayanan; Alex Kendall; Roberto Cipolla
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2017-01-02       Impact factor: 6.226

4.  Cell nuclei and cytoplasm joint segmentation using the sliding band filter.

Authors:  Pedro Quelhas; Monica Marcuzzo; Ana Maria Mendonça; Aurélio Campilho
Journal:  IEEE Trans Med Imaging       Date:  2010-06-03       Impact factor: 10.048

Review 5.  Fifty years of computer analysis in chest imaging: rule-based, machine learning, deep learning.

Authors:  Bram van Ginneken
Journal:  Radiol Phys Technol       Date:  2017-02-16

6.  Automatic Segmentation of Lung Carcinoma Using 3D Texture Features in 18-FDG PET/CT.

Authors:  Daniel Markel; Curtis Caldwell; Hamideh Alasti; Hany Soliman; Yee Ung; Justin Lee; Alexander Sun
Journal:  Int J Mol Imaging       Date:  2013-02-26
  6 in total
  6 in total

1.  Pulmonary nodule segmentation based on REMU-Net.

Authors:  Dongjie Li; Shanliang Yuan; Gang Yao
Journal:  Phys Eng Sci Med       Date:  2022-07-25

2.  Comparative evaluation of conventional and deep learning methods for semi-automated segmentation of pulmonary nodules on CT.

Authors:  Francesco Bianconi; Mario Luca Fravolini; Sofia Pizzoli; Isabella Palumbo; Matteo Minestrini; Maria Rondini; Susanna Nuvoli; Angela Spanu; Barbara Palumbo
Journal:  Quant Imaging Med Surg       Date:  2021-07

3.  CXR-RefineDet: Single-Shot Refinement Neural Network for Chest X-Ray Radiograph Based on Multiple Lesions Detection.

Authors:  Cong Lin; Yongbin Zheng; Xiuchun Xiao; Jialun Lin
Journal:  J Healthc Eng       Date:  2022-01-07       Impact factor: 2.682

4.  A bi-directional deep learning architecture for lung nodule semantic segmentation.

Authors:  Debnath Bhattacharyya; N Thirupathi Rao; Eali Stephen Neal Joshua; Yu-Chen Hu
Journal:  Vis Comput       Date:  2022-09-08       Impact factor: 2.835

5.  A Genetic Attack Against Machine Learning Classifiers to Steal Biometric Actigraphy Profiles from Health Related Sensor Data.

Authors:  Enrique Garcia-Ceja; Brice Morin; Anton Aguilar-Rivera; Michael Alexander Riegler
Journal:  J Med Syst       Date:  2020-09-15       Impact factor: 4.460

Review 6.  Towards Machine Learning-Aided Lung Cancer Clinical Routines: Approaches and Open Challenges.

Authors:  Francisco Silva; Tania Pereira; Inês Neves; Joana Morgado; Cláudia Freitas; Mafalda Malafaia; Joana Sousa; João Fonseca; Eduardo Negrão; Beatriz Flor de Lima; Miguel Correia da Silva; António J Madureira; Isabel Ramos; José Luis Costa; Venceslau Hespanhol; António Cunha; Hélder P Oliveira
Journal:  J Pers Med       Date:  2022-03-16
  6 in total

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