Literature DB >> 32139519

An atlas of the protein-coding genes in the human, pig, and mouse brain.

Evelina Sjöstedt1,2, Wen Zhong2, Linn Fagerberg2, Max Karlsson2, Nicholas Mitsios1, Csaba Adori1, Per Oksvold2, Fredrik Edfors2, Agnieszka Limiszewska1, Feria Hikmet3, Jinrong Huang4,5,6,7, Yutao Du5,8, Lin Lin4,6, Zhanying Dong4,5,6, Ling Yang4,5,6, Xin Liu5,8, Hui Jiang9, Xun Xu5,8, Jian Wang5,8, Huanming Yang5,8, Lars Bolund4,5,6, Adil Mardinoglu2, Cheng Zhang2, Kalle von Feilitzen2, Cecilia Lindskog3, Fredrik Pontén3, Yonglun Luo4,5,6, Tomas Hökfelt1, Mathias Uhlén10,2, Jan Mulder10.   

Abstract

The brain, with its diverse physiology and intricate cellular organization, is the most complex organ of the mammalian body. To expand our basic understanding of the neurobiology of the brain and its diseases, we performed a comprehensive molecular dissection of 10 major brain regions and multiple subregions using a variety of transcriptomics methods and antibody-based mapping. This analysis was carried out in the human, pig, and mouse brain to allow the identification of regional expression profiles, as well as to study similarities and differences in expression levels between the three species. The resulting data have been made available in an open-access Brain Atlas resource, part of the Human Protein Atlas, to allow exploration and comparison of the expression of individual protein-coding genes in various parts of the mammalian brain.
Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2020        PMID: 32139519     DOI: 10.1126/science.aay5947

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  97 in total

1.  Interneuron Origins in the Embryonic Porcine Medial Ganglionic Eminence.

Authors:  Mariana L Casalia; Tina Li; Harrison Ramsay; Pablo J Ross; Mercedes F Paredes; Scott C Baraban
Journal:  J Neurosci       Date:  2021-02-26       Impact factor: 6.167

2.  Microfluidic device with brain extracellular matrix promotes structural and functional maturation of human brain organoids.

Authors:  Ann-Na Cho; Yoonhee Jin; Yeonjoo An; Jin Kim; Yi Sun Choi; Jung Seung Lee; Junghoon Kim; Won-Young Choi; Dong-Jun Koo; Weonjin Yu; Gyeong-Eon Chang; Dong-Yoon Kim; Sung-Hyun Jo; Jihun Kim; Sung-Yon Kim; Yun-Gon Kim; Ju Young Kim; Nakwon Choi; Eunji Cheong; Young-Joon Kim; Hyunsoo Shawn Je; Hoon-Chul Kang; Seung-Woo Cho
Journal:  Nat Commun       Date:  2021-08-05       Impact factor: 14.919

3.  Target-specific control of olfactory bulb periglomerular cells by GABAergic and cholinergic basal forebrain inputs.

Authors:  Didier De Saint Jan
Journal:  Elife       Date:  2022-02-28       Impact factor: 8.140

4.  The dihydropyrimidine dehydrogenase gene contributes to heritable differences in sleep in mice.

Authors:  Brendan T Keenan; Raymond J Galante; Jie Lian; Lin Zhang; Xiaofeng Guo; Olivia J Veatch; Elissa J Chesler; W Timothy O'Brien; Karen L Svenson; Gary A Churchill; Allan I Pack
Journal:  Curr Biol       Date:  2021-10-14       Impact factor: 10.834

5.  Research on the Human Proteome Reaches a Major Milestone: >90% of Predicted Human Proteins Now Credibly Detected, According to the HUPO Human Proteome Project.

Authors:  Gilbert S Omenn; Lydie Lane; Christopher M Overall; Ileana M Cristea; Fernando J Corrales; Cecilia Lindskog; Young-Ki Paik; Jennifer E Van Eyk; Siqi Liu; Stephen R Pennington; Michael P Snyder; Mark S Baker; Nuno Bandeira; Ruedi Aebersold; Robert L Moritz; Eric W Deutsch
Journal:  J Proteome Res       Date:  2020-10-19       Impact factor: 4.466

6.  X-chromosome influences on neuroanatomical variation in humans.

Authors:  Travis T Mallard; Siyuan Liu; Jakob Seidlitz; Zhiwei Ma; Dustin Moraczewski; Adam Thomas; Armin Raznahan
Journal:  Nat Neurosci       Date:  2021-07-22       Impact factor: 24.884

7.  The Human Protein Atlas-Spatial localization of the human proteome in health and disease.

Authors:  Andreas Digre; Cecilia Lindskog
Journal:  Protein Sci       Date:  2020-11-13       Impact factor: 6.725

8.  Low-Expressing Synucleinopathy Mouse Models Based on Oligomer-Forming Mutations and C-Terminal Truncation of α-Synuclein.

Authors:  Ana Martinez Hernandez; Ivan Silbern; Insa Geffers; Lars Tatenhorst; Stefan Becker; Henning Urlaub; Markus Zweckstetter; Christian Griesinger; Gregor Eichele
Journal:  Front Neurosci       Date:  2021-06-17       Impact factor: 4.677

9.  Multi-cohort profiling reveals elevated CSF levels of brain-enriched proteins in Alzheimer's disease.

Authors:  Sofia Bergström; Julia Remnestål; Jamil Yousef; Jennie Olofsson; Ioanna Markaki; Stephanie Carvalho; Jean-Christophe Corvol; Kim Kultima; Lena Kilander; Malin Löwenmark; Martin Ingelsson; Kaj Blennow; Henrik Zetterberg; Bengt Nellgård; Frederic Brosseron; Michael T Heneka; Beatriz Bosch; Raquel Sanchez-Valle; Anna Månberg; Per Svenningsson; Peter Nilsson
Journal:  Ann Clin Transl Neurol       Date:  2021-06-15       Impact factor: 4.511

10.  The Prop1-like homeobox gene unc-42 specifies the identity of synaptically connected neurons.

Authors:  Emily G Berghoff; Lori Glenwinkel; Abhishek Bhattacharya; HaoSheng Sun; Erdem Varol; Nicki Mohammadi; Amelia Antone; Yi Feng; Ken Nguyen; Steven J Cook; Jordan F Wood; Neda Masoudi; Cyril C Cros; Yasmin H Ramadan; Denise M Ferkey; David H Hall; Oliver Hobert
Journal:  Elife       Date:  2021-06-24       Impact factor: 8.140

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