Literature DB >> 32132283

Solvent influence on the crystal packing of 6-aminothiocytosine.

Anita M Grześkiewicz1, Agata Ostrowska1, Maciej Kubicki1.   

Abstract

The crystal structures of 6-aminothiocytosine (systematic name: 4,6-diamino-1,2-dihydropyrimidine-2-thione, DAPMT, C4H6N4S), its hemihydrate (0.5H2O) and its dimethylformamide (DMF, C3H7NO) monosolvate were compared, and the influence of the type of solvent on the supramolecular motifs was analysed. In all three crystal structures, there are two symmetry-independent molecules (A and B), and these molecules are connected by three relatively short and directional hydrogen bonds to form chains of alternating A and B molecules. A further organization of these chains is dependent on the nature of the solvent molecule. In the unsolvated form, two orientations of the neighbouring chains are observed, and similar motifs - but only one per structure - can be observed in the solvated structures. These two different motifs can be connected by two different kinds of contacts, i.e. either π-π (hemihydrate) or staple-supported S...S (DMF). In the crystal structures, the O atoms of the solvent molecules are double acceptors of the same type of hydrogen bonds and bind the chains of DAPMT molecules into different motifs (dimeric or infinite chains). A Hirshfeld fingerprint analysis was used for visualization and additional interpretation of these results.

Entities:  

Keywords:  Hirshfeld; S...S interaction; aminothiocytosine; crystal structure; modified nucleobase; pyrimidine-2-thione; solvate; thiobase

Year:  2020        PMID: 32132283     DOI: 10.1107/S2053229620001692

Source DB:  PubMed          Journal:  Acta Crystallogr C Struct Chem        ISSN: 2053-2296            Impact factor:   1.172


  1 in total

1.  The Influence of Solvent on the Crystal Packing of Ethacridinium Phthalate Solvates.

Authors:  Artur Mirocki; Artur Sikorski
Journal:  Materials (Basel)       Date:  2020-11-10       Impact factor: 3.623

  1 in total

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