Literature DB >> 32131491

Systematic Review of Polygenic Risk Scores for Type 1 and Type 2 Diabetes.

Felipe Padilla-Martínez1,2, Francois Collin1, Miroslaw Kwasniewski1, Adam Kretowski2,3.   

Abstract

Recent studies have led to considerable advances in the identification of genetic variants associated with type 1 and type 2 diabetes. An approach for converting genetic data into a predictive measure of disease susceptibility is to add the risk effects of loci into a polygenic risk score. In order to summarize the recent findings, we conducted a systematic review of studies comparing the accuracy of polygenic risk scores developed during the last two decades. We selected 15 risk scores from three databases (Scopus, Web of Science and PubMed) enrolled in this systematic review. We identified three polygenic risk scores that discriminate between type 1 diabetes patients and healthy people, one that discriminate between type 1 and type 2 diabetes, two that discriminate between type 1 and monogenic diabetes and nine polygenic risk scores that discriminate between type 2 diabetes patients and healthy people. Prediction accuracy of polygenic risk scores was assessed by comparing the area under the curve. The actual benefits, potential obstacles and possible solutions for the implementation of polygenic risk scores in clinical practice were also discussed. Develop strategies to establish the clinical validity of polygenic risk scores by creating a framework for the interpretation of findings and their translation into actual evidence, are the way to demonstrate their utility in medical practice.

Entities:  

Keywords:  diagnosis; genetics; polygenic risk score; type 1 diabetes; type 2 diabetes

Year:  2020        PMID: 32131491     DOI: 10.3390/ijms21051703

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  11 in total

1.  Development and validation of a trans-ancestry polygenic risk score for type 2 diabetes in diverse populations.

Authors:  Tian Ge; Marguerite R Irvin; Amit Patki; Vinodh Srinivasasainagendra; Yen-Feng Lin; Hemant K Tiwari; Nicole D Armstrong; Barbara Benoit; Chia-Yen Chen; Karmel W Choi; James J Cimino; Brittney H Davis; Ozan Dikilitas; Bethany Etheridge; Yen-Chen Anne Feng; Vivian Gainer; Hailiang Huang; Gail P Jarvik; Christopher Kachulis; Eimear E Kenny; Atlas Khan; Krzysztof Kiryluk; Leah Kottyan; Iftikhar J Kullo; Christoph Lange; Niall Lennon; Aaron Leong; Edyta Malolepsza; Ayme D Miles; Shawn Murphy; Bahram Namjou; Renuka Narayan; Mark J O'Connor; Jennifer A Pacheco; Emma Perez; Laura J Rasmussen-Torvik; Elisabeth A Rosenthal; Daniel Schaid; Maria Stamou; Miriam S Udler; Wei-Qi Wei; Scott T Weiss; Maggie C Y Ng; Jordan W Smoller; Matthew S Lebo; James B Meigs; Nita A Limdi; Elizabeth W Karlson
Journal:  Genome Med       Date:  2022-06-29       Impact factor: 15.266

2.  Microbial Risk Score for Capturing Microbial Characteristics, Integrating Multi-omics Data, and Predicting Disease Risk.

Authors:  Chan Wang; Leopoldo N Segal; Jiyuan Hu; Boyan Zhou; Richard Hayes; Jiyoung Ahn; Huilin Li
Journal:  bioRxiv       Date:  2022-06-08

3.  Integrating polygenic risk scores in the prediction of type 2 diabetes risk and subtypes in British Pakistanis and Bangladeshis: A population-based cohort study.

Authors:  Sam Hodgson; Qin Qin Huang; Neneh Sallah; Chris J Griffiths; William G Newman; Richard C Trembath; John Wright; R Thomas Lumbers; Karoline Kuchenbaecker; David A van Heel; Rohini Mathur; Hilary C Martin; Sarah Finer
Journal:  PLoS Med       Date:  2022-05-19       Impact factor: 11.613

4.  Stability of polygenic scores across discovery genome-wide association studies.

Authors:  Laura M Schultz; Alison K Merikangas; Kosha Ruparel; Sébastien Jacquemont; David C Glahn; Raquel E Gur; Ran Barzilay; Laura Almasy
Journal:  HGG Adv       Date:  2022-01-21

5.  A Polygenic Score for Type 2 Diabetes Improves Risk Stratification Beyond Current Clinical Screening Factors in an Ancestrally Diverse Sample.

Authors:  James R Ashenhurst; Olga V Sazonova; Olivia Svrchek; Stacey Detweiler; Ryosuke Kita; Liz Babalola; Matthew McIntyre; Stella Aslibekyan; Pierre Fontanillas; Suyash Shringarpure; Jeffrey D Pollard; Bertram L Koelsch
Journal:  Front Genet       Date:  2022-04-26       Impact factor: 4.772

Review 6.  Genetics of Type 2 Diabetes: Past, Present, and Future.

Authors:  Markku Laakso; Lilian Fernandes Silva
Journal:  Nutrients       Date:  2022-08-04       Impact factor: 6.706

7.  Microbial risk score for capturing microbial characteristics, integrating multi-omics data, and predicting disease risk.

Authors:  Chan Wang; Leopoldo N Segal; Jiyuan Hu; Boyan Zhou; Richard B Hayes; Jiyoung Ahn; Huilin Li
Journal:  Microbiome       Date:  2022-08-05       Impact factor: 16.837

8.  Body Mass Index and Birth Weight Improve Polygenic Risk Score for Type 2 Diabetes.

Authors:  Avigail Moldovan; Yedael Y Waldman; Nadav Brandes; Michal Linial
Journal:  J Pers Med       Date:  2021-06-21

Review 9.  Coronary Heart Disease in Type 2 Diabetes Mellitus: Genetic Factors and Their Mechanisms, Gene-Gene, and Gene-Environment Interactions in the Asian Populations.

Authors:  Khairul Anwar Zarkasi; Nor Azian Abdul Murad; Norfazilah Ahmad; Rahman Jamal; Noraidatulakma Abdullah
Journal:  Int J Environ Res Public Health       Date:  2022-01-06       Impact factor: 3.390

10.  Three models for the regulation of polygenic scores in reproduction.

Authors:  Sarah Munday; Julian Savulescu
Journal:  J Med Ethics       Date:  2021-01-18       Impact factor: 2.903

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