Literature DB >> 32130117

Promoting Reproducible Research for Characterizing Nonmedical Use of Medications Through Data Annotation: Description of a Twitter Corpus and Guidelines.

Karen O'Connor1, Abeed Sarker2, Jeanmarie Perrone3, Graciela Gonzalez Hernandez1.   

Abstract

BACKGROUND: Social media data are being increasingly used for population-level health research because it provides near real-time access to large volumes of consumer-generated data. Recently, a number of studies have explored the possibility of using social media data, such as from Twitter, for monitoring prescription medication abuse. However, there is a paucity of annotated data or guidelines for data characterization that discuss how information related to abuse-prone medications is presented on Twitter.
OBJECTIVE: This study discusses the creation of an annotated corpus suitable for training supervised classification algorithms for the automatic classification of medication abuse-related chatter. The annotation strategies used for improving interannotator agreement (IAA), a detailed annotation guideline, and machine learning experiments that illustrate the utility of the annotated corpus are also described.
METHODS: We employed an iterative annotation strategy, with interannotator discussions held and updates made to the annotation guidelines at each iteration to improve IAA for the manual annotation task. Using the grounded theory approach, we first characterized tweets into fine-grained categories and then grouped them into 4 broad classes-abuse or misuse, personal consumption, mention, and unrelated. After the completion of manual annotations, we experimented with several machine learning algorithms to illustrate the utility of the corpus and generate baseline performance metrics for automatic classification on these data.
RESULTS: Our final annotated set consisted of 16,443 tweets mentioning at least 20 abuse-prone medications including opioids, benzodiazepines, atypical antipsychotics, central nervous system stimulants, and gamma-aminobutyric acid analogs. Our final overall IAA was 0.86 (Cohen kappa), which represents high agreement. The manual annotation process revealed the variety of ways in which prescription medication misuse or abuse is discussed on Twitter, including expressions indicating coingestion, nonmedical use, nonstandard route of intake, and consumption above the prescribed doses. Among machine learning classifiers, support vector machines obtained the highest automatic classification accuracy of 73.00% (95% CI 71.4-74.5) over the test set (n=3271).
CONCLUSIONS: Our manual analysis and annotations of a large number of tweets have revealed types of information posted on Twitter about a set of abuse-prone prescription medications and their distributions. In the interests of reproducible and community-driven research, we have made our detailed annotation guidelines and the training data for the classification experiments publicly available, and the test data will be used in future shared tasks. ©Karen O'Connor, Abeed Sarker, Jeanmarie Perrone, Graciela Gonzalez Hernandez. Originally published in the Journal of Medical Internet Research (http://www.jmir.org), 26.02.2020.

Entities:  

Keywords:  infodemiology; infoveillance; machine learning; natural language processing; prescription drug misuse; social media; substance abuse detection

Year:  2020        PMID: 32130117     DOI: 10.2196/15861

Source DB:  PubMed          Journal:  J Med Internet Res        ISSN: 1438-8871            Impact factor:   5.428


  5 in total

1.  Classifying Characteristics of Opioid Use Disorder From Hospital Discharge Summaries Using Natural Language Processing.

Authors:  Melissa N Poulsen; Philip J Freda; Vanessa Troiani; Anahita Davoudi; Danielle L Mowery
Journal:  Front Public Health       Date:  2022-05-09

Review 2.  Social Media as a Research Tool (SMaaRT) for Risky Behavior Analytics: Methodological Review.

Authors:  Tavleen Singh; Kirk Roberts; Trevor Cohen; Nathan Cobb; Jing Wang; Kayo Fujimoto; Sahiti Myneni
Journal:  JMIR Public Health Surveill       Date:  2020-11-30

3.  Text classification models for the automatic detection of nonmedical prescription medication use from social media.

Authors:  Mohammed Ali Al-Garadi; Yuan-Chi Yang; Haitao Cai; Yucheng Ruan; Karen O'Connor; Gonzalez-Hernandez Graciela; Jeanmarie Perrone; Abeed Sarker
Journal:  BMC Med Inform Decis Mak       Date:  2021-01-26       Impact factor: 2.796

Review 4.  Bootstrapping semi-supervised annotation method for potential suicidal messages.

Authors:  Roberto Wellington Acuña Caicedo; José Manuel Gómez Soriano; Héctor Andrés Melgar Sasieta
Journal:  Internet Interv       Date:  2022-02-28

5.  Automatic gender detection in Twitter profiles for health-related cohort studies.

Authors:  Yuan-Chi Yang; Mohammed Ali Al-Garadi; Jennifer S Love; Jeanmarie Perrone; Abeed Sarker
Journal:  JAMIA Open       Date:  2021-06-23
  5 in total

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