Literature DB >> 32124949

A novel loop‑mediated isothermal amplification method for efficient and robust detection of EGFR mutations.

Sho Horiuchi1, Yuichi Saito2, Atsuka Matsui3, Nobumasa Takahashi4, Tomohiko Ikeya4, Eishin Hoshi4, Yoshihiko Shimizu5, Masanori Yasuda1.   

Abstract

The activation of somatic mutations conferring sensitivity to epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors has been widely used in the development of advanced or metastatic primary lung cancer therapy. Therefore, identification of EGFR mutations is essential. In the present study, a loop‑mediated isothermal amplification (LAMP) method was used to identify EGFR mutations, and its efficiency was compared with the Therascreen quantitative PCR assay. Using LAMP and Therascreen to analyze surgically resected tissue samples from patients with pulmonary adenocarcinoma, EGFR mutations were observed in 32/59 tumor samples (LAMP) and 33/59 tumor samples (Therascreen). Notably, the LAMP assay identified one tumor as wild‑type, which had previously been identified as a deletion mutation in exon 19 via the Therascreen assay (Case X). However, the direct sequencing to confirm the EGFR status of the Case X adhered to the results of the LAMP assay. Further experiments using Case X DNA identified this exon 19 deletion mutation using both methods. In addition, a novel deletion mutation in exon 19 of the EGFR was identified. Overall, the present study shows that the LAMP method may serve as a valuable alternative for the identification oncogene mutations.

Entities:  

Year:  2020        PMID: 32124949     DOI: 10.3892/ijo.2020.4961

Source DB:  PubMed          Journal:  Int J Oncol        ISSN: 1019-6439            Impact factor:   5.650


  3 in total

1.  Detection of epidermal growth factor receptor T790M mutation by allele-specific loop mediated isothermal amplification.

Authors:  Srividya Arjuna; Gunimala Chakraborty; Rajesh Venkataram; Pandyanda Nanjappa Dechamma; Anirban Chakraborty
Journal:  J Carcinog       Date:  2020-06-11

2.  Comparative study of the loop-mediated isothermal amplification method and the QIAGEN therascreen PCR kit for the detection of EGFR mutations in non-small cell lung cancer.

Authors:  Yuichi Saito; Nobumasa Takahashi; Atsuka Matsui; Satoru Michiyuki; Yoshikane Yamauchi; Yoshihiko Shimizu; Eishin Hoshi; Yukinori Sakao; Masafumi Kawamura
Journal:  J Thorac Dis       Date:  2021-02       Impact factor: 2.895

3.  Loop-Mediated Isothermal Amplification as Point-of-Care Testing for EGFR-Mutated Lung Adenocarcinoma.

Authors:  Yuichi Saito; Atsuka Matsui; Satoru Michiyuki; Hiroaki Morooka; Takayuki Ibi; Yoshikane Yamauchi; Nobumasa Takahashi; Yoshihiko Shimizu; Tomohiko Ikeya; Eishin Hoshi; Yukinori Sakao; Masafumi Kawamura
Journal:  Micromachines (Basel)       Date:  2022-06-06       Impact factor: 3.523

  3 in total

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