Literature DB >> 32123041

A Synthetic Approach Allows Rapid Characterization of the Maize Nuclear Auxin Response Circuit.

Román Ramos Báez1, Yuli Buckley2, Han Yu2, Zongliang Chen3, Andrea Gallavotti3,4, Jennifer L Nemhauser1, Britney L Moss5.   

Abstract

Auxin plays a key role across all land plants in growth and developmental processes. Although auxin signaling function has diverged and expanded, differences in the molecular functions of signaling components have largely been characterized in Arabidopsis (Arabidopsis thaliana). Here, we used the nuclear Auxin Response Circuit recapitulated in yeast (Saccharomyces cerevisiae) system to functionally annotate maize (Zea mays) auxin signaling components, focusing on genes expressed during the development of ear and tassel inflorescences. All 16 maize auxin/indole-3-acetic acid repressor proteins were degraded in response to auxin with rates that depended on both receptor and repressor identities. When fused to the maize TOPLESS homolog RAMOSA1 ENHANCER LOCUS2, maize auxin/indole-3-acetic acids were able to repress AUXIN RESPONSE FACTOR transcriptional activity. A complete auxin response circuit comprising all maize components, including the ZmAFB2/3 b1 maize AUXIN SIGNALING F-BOX (AFB) receptor, was fully functional. The ZmAFB2/3 b1 auxin receptor was more sensitive to hormone than AtAFB2 and allowed for rapid circuit activation upon auxin addition. These results validate the conserved role of predicted auxin response genes in maize as well as provide evidence that a synthetic approach can facilitate broader comparative studies across the wide range of species with sequenced genomes.
© 2020 American Society of Plant Biologists. All Rights Reserved.

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Year:  2020        PMID: 32123041      PMCID: PMC7140906          DOI: 10.1104/pp.19.01475

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  45 in total

1.  Rapid degradation of auxin/indoleacetic acid proteins requires conserved amino acids of domain II and is proteasome dependent.

Authors:  J A Ramos; N Zenser; O Leyser; J Callis
Journal:  Plant Cell       Date:  2001-10       Impact factor: 11.277

2.  Cloning and expression of ntnD, encoding a novel NAD(P)(+)-independent 4-nitrobenzyl alcohol dehydrogenase from Pseudomonas sp. Strain TW3.

Authors:  K D James; M A Hughes; P A Williams
Journal:  J Bacteriol       Date:  2000-06       Impact factor: 3.490

3.  Insights into the Evolution and Function of Auxin Signaling F-Box Proteins in Arabidopsis thaliana Through Synthetic Analysis of Natural Variants.

Authors:  R Clay Wright; Mollye L Zahler; Stacey R Gerben; Jennifer L Nemhauser
Journal:  Genetics       Date:  2017-07-31       Impact factor: 4.562

4.  Auxin signaling modules regulate maize inflorescence architecture.

Authors:  Mary Galli; Qiujie Liu; Britney L Moss; Simon Malcomber; Wei Li; Craig Gaines; Silvia Federici; Jessica Roshkovan; Robert Meeley; Jennifer L Nemhauser; Andrea Gallavotti
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-13       Impact factor: 11.205

Review 5.  Standardization in synthetic biology: an engineering discipline coming of age.

Authors:  Thomas Decoene; Brecht De Paepe; Jo Maertens; Pieter Coussement; Gert Peters; Sofie L De Maeseneire; Marjan De Mey
Journal:  Crit Rev Biotechnol       Date:  2017-09-27       Impact factor: 8.429

6.  Aberrant spikelet and panicle1, encoding a TOPLESS-related transcriptional co-repressor, is involved in the regulation of meristem fate in rice.

Authors:  Akiko Yoshida; Yoshihiro Ohmori; Hidemi Kitano; Fumio Taguchi-Shiobara; Hiro-Yuki Hirano
Journal:  Plant J       Date:  2012-01-13       Impact factor: 6.417

7.  The Arabidopsis Aux/IAA protein family has diversified in degradation and auxin responsiveness.

Authors:  Kate A Dreher; Jessica Brown; Robert E Saw; Judy Callis
Journal:  Plant Cell       Date:  2006-02-17       Impact factor: 11.277

8.  Rebuilding core abscisic acid signaling pathways of Arabidopsis in yeast.

Authors:  Moritz Ruschhaupt; Julia Mergner; Stefanie Mucha; Michael Papacek; Isabel Doch; Stefanie V Tischer; Daniel Hemmler; David Chiasson; Kai H Edel; Jörg Kudla; Philippe Schmitt-Kopplin; Bernhard Kuster; Erwin Grill
Journal:  EMBO J       Date:  2019-08-01       Impact factor: 11.598

9.  Conserved and unique features of the homeologous maize Aux/IAA proteins ROOTLESS WITH UNDETECTABLE MERISTEM 1 and RUM1-like 1.

Authors:  Yanxiang Zhang; Caroline Marcon; Huanhuan Tai; Inga von Behrens; Yvonne Ludwig; Stefan Hey; Kenneth W Berendzen; Frank Hochholdinger
Journal:  J Exp Bot       Date:  2015-12-15       Impact factor: 6.992

10.  Origin and evolution of the nuclear auxin response system.

Authors:  Sumanth K Mutte; Hirotaka Kato; Carl Rothfels; Michael Melkonian; Gane Ka-Shu Wong; Dolf Weijers
Journal:  Elife       Date:  2018-03-27       Impact factor: 8.140

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  4 in total

1.  Update on Receptors and Signaling.

Authors:  Alice Y Cheung; Li-Jia Qu; Eugenia Russinova; Yunde Zhao; Cyril Zipfel
Journal:  Plant Physiol       Date:  2020-04       Impact factor: 8.340

2.  Mix, Match, and Maize: A Synthetic System for Maize Nuclear Auxin Response Circuits.

Authors:  Dhineshkumar Thiruppathi
Journal:  Plant Physiol       Date:  2020-06       Impact factor: 8.340

Review 3.  Expansion and innovation in auxin signaling: where do we grow from here?

Authors:  Román Ramos Báez; Jennifer L Nemhauser
Journal:  Development       Date:  2021-03-12       Impact factor: 6.868

Review 4.  Applications of cell- and tissue-specific 'omics to improve plant productivity.

Authors:  Bhavna Hurgobin; Mathew G Lewsey
Journal:  Emerg Top Life Sci       Date:  2022-04-15
  4 in total

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