Literature DB >> 32121503

Transcriptomics and Proteomics Reveal the Cellulose and Pectin Metabolic Processes in the Tension Wood (Non-G-Layer) of Catalpa bungei.

Yao Xiao1, Fei Yi1, Juanjuan Ling1, Zhi Wang1, Kun Zhao2, Na Lu1, Guanzheng Qu3, Lisheng Kong4, Wenjun Ma1, Junhui Wang1.   

Abstract

: Catalpa bungei is an economically important tree with high-quality wood and highly valuable to the study of wood formation. In this work, the xylem microstructure of C. bungei tension wood (TW) was observed, and we performed transcriptomics, proteomics and Raman spectroscopy of TW, opposite wood (OW) and normal wood (NW). The results showed that there was no obvious gelatinous layer (G-layer) in the TW of C. bungei and that the secondary wall deposition in the TW was reduced compared with that in the OW and NW. We found that most of the differentially expressed mRNAs and proteins were involved in carbohydrate polysaccharide synthesis. Raman spectroscopy results indicated that the cellulose and pectin content and pectin methylation in the TW were lower than those in the OW and NW, and many genes and proteins involved in the metabolic pathways of cellulose and pectin, such as galacturonosyltransferase (GAUT), polygalacturonase (PG), endoglucanase (CLE) and β-glucosidase (BGLU) genes, were significantly upregulated in TW. In addition, we found that the MYB2 transcription factor may regulate the pectin degradation genes PG1 and PG3, and ARF, ERF, SBP and MYB1 may be the key transcription factors regulating the synthesis and decomposition of cellulose. In contrast to previous studies on TW with a G-layer, our results revealed a change in metabolism in TW without a G-layer, and we inferred that the change in the pectin type, esterification and cellulose characteristics in the TW of C. bungei may contribute to high tensile stress. These results will enrich the understanding of the mechanism of TW formation.

Entities:  

Keywords:  Catalpa bungei; Raman spectroscopy; cellulose; pectin; proteomics; tension wood; transcriptome

Year:  2020        PMID: 32121503     DOI: 10.3390/ijms21051686

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  7 in total

1.  Efficient Transformation of Catalpa bungei Shows Crystal Genes Conferring Resistance to the Shoot Borer Omphisa plagialis.

Authors:  Fenni Lv; Peng Wang; Enliang Zhang; Lingling Ma; Lulu Gao; Rutong Yang; Qing Wang; Ya Li
Journal:  Front Plant Sci       Date:  2021-12-24       Impact factor: 5.753

2.  Comprehensive Transcriptome Analysis of Stem-Differentiating Xylem Upon Compression Stress in Cunninghamia Lanceolata.

Authors:  Zekun Zhang; Huiyuan Wang; Ji Wu; Yandong Jin; Shengwu Xiao; Tao Li; Xuqinq Liu; Hangxiao Zhang; Zeyu Zhang; Jun Su; Jingzao Liu; Xiaoyan Wang; Yubang Gao; Xiangqing Ma; Lianfeng Gu
Journal:  Front Genet       Date:  2022-03-03       Impact factor: 4.599

3.  Integrated Transcriptome and Proteome Analysis Provides Insight into the Ribosome Inactivating Proteins in Plukenetia volubilis Seeds.

Authors:  Guo Liu; Zhihua Wu; Yan Peng; Xiuhua Shang; Liqiong Gao
Journal:  Int J Mol Sci       Date:  2022-08-24       Impact factor: 6.208

4.  Multi-omics sequencing provides insight into floral transition in Catalpa bungei. C.A. Mey.

Authors:  Zhi Wang; Wenjun Ma; Tianqing Zhu; Nan Lu; Fangqun Ouyang; Nan Wang; Guijuan Yang; Lisheng Kong; Guanzheng Qu; Shougong Zhang; Junhui Wang
Journal:  BMC Genomics       Date:  2020-07-22       Impact factor: 3.969

5.  Genome-wide analysis of lncRNA and mRNA expression and endogenous hormone regulation during tension wood formation in Catalpa bungei.

Authors:  Yao Xiao; Fei Yi; Juanjuan Ling; Guijuan Yang; Na Lu; Zirui Jia; Junchen Wang; Kun Zhao; Junhui Wang; Wenjun Ma
Journal:  BMC Genomics       Date:  2020-09-05       Impact factor: 3.969

6.  Plant Cell and Organism Development.

Authors:  Robert Hasterok; Alexander Betekhtin
Journal:  Int J Mol Sci       Date:  2020-08-06       Impact factor: 5.923

7.  A PtrLBD39-mediated transcriptional network regulates tension wood formation in Populus trichocarpa.

Authors:  Jing Yu; Chenguang Zhou; Danning Li; Shuang Li; Ying-Chung Jimmy Lin; Jack P Wang; Vincent L Chiang; Wei Li
Journal:  Plant Commun       Date:  2021-10-20
  7 in total

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