Literature DB >> 32120838

Association between the APOA2 rs3813627 Single Nucleotide Polymorphism and HDL and APOA1 Levels Through BMI.

Hatim Boughanem1, Borja Bandera-Merchán2, Pablo Hernández-Alonso2,3,4, Noelia Moreno-Morales5, Francisco José Tinahones2,3, José Lozano6, Sonsoles Morcillo2,3, Manuel Macias-Gonzalez2,3.   

Abstract

Background: The interaction between obesity and genetic traits on high density lipoprotein (HDL) levels has been extensively studied. The variance of serum HDL has a strong genetic heritability, although the studied variant only explains a small part of this variation. The goal of this study was to investigate the associations between the apolipoprotein type 2 (APOA2) rs3813627 single nucleotide polymorphism (SNP) and anthropometric and biochemical variables, though body mass index (BMI).
Methods: This study included 153 subjects (91 overweight/obese (BMI³25 kg/m2) and 62 non-obese individuals (BMI < 25 kg/m2)). The APOA2 rs3813627 SNP was selected and genotyped. Genotype analysis was performed to analyze the associations between APOA2 SNPs and anthropometric and biochemical variables through BMI.
Results: The APOA2 rs3813627 TT genotype was associated with low HDL levels in comparison with the APOA2 rs3813627 GG and GT genotype in overweight/obese individuals, but not in the non-obese subjects (p < 0.05). The same trend was observed in the apolipoprotein type 1 (APOA1) protein levels (p < 0.05). Correlation analysis revealed a negative correlation between HDL and APOA1 levels and APOA2 rs3813627 SNP under recessive model (p < 0.05). The odds ratio for low HDL levels was 3.76 and 3.94 for low APOA1 levels. The mediation analysis of APOA2 rs3813627 SNP through BMI showed a full mediation on HDL and partial mediation on APOA1 levels (p < 0.05). Bioinformatic analysis showed that rs3813627 lies in the APOA2 promoter and overlaps motifs for several bound transcription factors.
Conclusion: On the basis of these data, the APOA2 rs3813627 SNP is associated with low HDL and APOA1 levels susceptibility, and this effect was mediated by an increased BMI.

Entities:  

Keywords:  APOA1; APOA2; BMI; HDL; SNP; rs3813627

Year:  2020        PMID: 32120838     DOI: 10.3390/biomedicines8030044

Source DB:  PubMed          Journal:  Biomedicines        ISSN: 2227-9059


  1 in total

1.  Screening and identification of key genes between liver hepatocellular carcinoma (LIHC) and cholangiocarcinoma (CHOL) by bioinformatic analysis.

Authors:  Xindan Kang; Li Bai; Xiaoguang Qi; Jing Wang
Journal:  Medicine (Baltimore)       Date:  2020-12-11       Impact factor: 1.817

  1 in total

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