Literature DB >> 32117570

Constructing a knowledge-based heterogeneous information graph for medical health status classification.

Thuan Pham1, Xiaohui Tao1, Ji Zhang1, Jianming Yong1.   

Abstract

Applying Pearson correlation and semantic relations in building a heterogeneous information graph (HIG) to develop a classification model has achieved a notable performance in improving the accuracy of predicting the status of health risks. In this study, the approach that was used, integrated knowledge of the medical domain as well as taking advantage of applying Pearson correlation and semantic relations in building a classification model for diagnosis. The research mined knowledge which was extracted from titles and abstracts of MEDLINE to discover how to assess the links between objects relating to medical concepts. A knowledge-base HIG model then was developed for the prediction of a patient's health status. The results of the experiment showed that the knowledge-base model was superior to the baseline model and has demonstrated that the knowledge-base could help improve the performance of the classification model. The contribution of this study has been to provide a framework for applying a knowledge-base in the classification model which helps these models achieve the best performance of predictions. This study has also contributed a model to medical practice to help practitioners become more confident in making final decisions in diagnosing illness. Moreover, this study affirmed that biomedical literature could assist in building a classification model. This contribution will be advantageous for future researchers in mining the knowledge-base to develop different kinds of classification models. © Springer Nature Switzerland AG 2020.

Entities:  

Keywords:  Classification; Electronic health data; Healthcare; Knowledge graph

Year:  2020        PMID: 32117570      PMCID: PMC7021844          DOI: 10.1007/s13755-020-0100-6

Source DB:  PubMed          Journal:  Health Inf Sci Syst        ISSN: 2047-2501


  27 in total

1.  Construction of a semi-automated ICD-10 coding help system to optimize medical and economic coding.

Authors:  Suzanne Pereira; Aurélie Névéol; Philippe Massari; Michel Joubert; Stefan Darmoni
Journal:  Stud Health Technol Inform       Date:  2006

2.  Improving data and knowledge management to better integrate health care and research.

Authors:  M Cases; L I Furlong; J Albanell; R B Altman; R Bellazzi; S Boyer; A Brand; A J Brookes; S Brunak; T W Clark; J Gea; P Ghazal; N Graf; R Guigó; T E Klein; N López-Bigas; V Maojo; B Mons; M Musen; J L Oliveira; A Rowe; P Ruch; A Shabo; E H Shortliffe; A Valencia; J van der Lei; M A Mayer; F Sanz
Journal:  J Intern Med       Date:  2013-07-15       Impact factor: 8.989

3.  Generating disease-pertinent treatment vocabularies from MEDLINE citations.

Authors:  Liqin Wang; Guilherme Del Fiol; Bruce E Bray; Peter J Haug
Journal:  J Biomed Inform       Date:  2016-11-16       Impact factor: 6.317

4.  Automated acquisition of disease drug knowledge from biomedical and clinical documents: an initial study.

Authors:  Elizabeth S Chen; George Hripcsak; Hua Xu; Marianthi Markatou; Carol Friedman
Journal:  J Am Med Inform Assoc       Date:  2007-10-18       Impact factor: 4.497

5.  Extracting and transforming clinical guidelines into pathway models for different hospital information systems.

Authors:  Britta Böckmann; Katja Heiden
Journal:  Health Inf Sci Syst       Date:  2013-11-04

6.  Risk prediction for chronic kidney disease progression using heterogeneous electronic health record data and time series analysis.

Authors:  Adler Perotte; Rajesh Ranganath; Jamie S Hirsch; David Blei; Noémie Elhadad
Journal:  J Am Med Inform Assoc       Date:  2015-04-20       Impact factor: 4.497

7.  Large-scale extraction of accurate drug-disease treatment pairs from biomedical literature for drug repurposing.

Authors:  Rong Xu; Quanqiu Wang
Journal:  BMC Bioinformatics       Date:  2013-06-06       Impact factor: 3.169

8.  dRiskKB: a large-scale disease-disease risk relationship knowledge base constructed from biomedical text.

Authors:  Rong Xu; Li Li; Quanqiu Wang
Journal:  BMC Bioinformatics       Date:  2014-04-12       Impact factor: 3.169

9.  Resources for assigning MeSH IDs to Japanese medical terms.

Authors:  Yuka Tateisi
Journal:  Genomics Inform       Date:  2019-06-27

10.  The "etiome": identification and clustering of human disease etiological factors.

Authors:  Yueyi I Liu; Paul H Wise; Atul J Butte
Journal:  BMC Bioinformatics       Date:  2009-02-05       Impact factor: 3.169

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  1 in total

1.  Predicting the relationships between gut microbiota and mental disorders with knowledge graphs.

Authors:  Ting Liu; Xueli Pan; Xu Wang; K Anton Feenstra; Jaap Heringa; Zhisheng Huang
Journal:  Health Inf Sci Syst       Date:  2020-11-24
  1 in total

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