Literature DB >> 32116085

TRAPPing a neurological disorder: from yeast to humans.

Zhanna Lipatova1, Nicole Van Bergen2, Daniela Stanga3, Michael Sacher3, John Christodoulou2, Nava Segev1.   

Abstract

The modular complex TRAPP acts as an activator of a subgroup of Ypt/RAB GTPases. The substrate GTPases and TRAPP are conserved from yeast to human cells, required for secretion and macroautophagy/autophagy and implicated in human disease. All TRAPP complexes contain four core subunits essential for cell viability, and until recently there were no human diseases associated with any core TRAPP subunit. Recently, we reported a neurological disorder associated with a pathogenic variant of the core TRAPP subunit TRAPPC4. This variant results in lower levels of full-length TRAPPC4 protein and the TRAPP complex. A conditional mutation of the yeast homolog of TRAPPC4, Trs23, also results in a lower level of the protein and the TRAPP complex. Phenotypic analysis of the yeast mutant cells reveals a minor defect in secretion and a major defect in autophagy. Similarly, primary fibroblasts derived from human patients also exhibit minor and severe defects in secretion and autophagy, respectively. We propose that the autophagy defect caused by the pathogenic-TRAPPC4 variant results in the severe neurological disorder. Moreover, we hypothesize that low levels of the core TRAPP complex are more detrimental to autophagy than to secretion, and that the long-term autophagy defect is especially harmful to neuronal cells.Abbreviations: ER: endoplasmic reticulum; PM: plasma membrane; TRAPP: transport protein particle; Ypt: yeast protein transport.

Entities:  

Keywords:  Autophagy; GTPases; TRAPP complex; TRAPPC4; Trs23; Ypt/RAB; intracellular trafficking

Year:  2020        PMID: 32116085      PMCID: PMC7144875          DOI: 10.1080/15548627.2020.1736873

Source DB:  PubMed          Journal:  Autophagy        ISSN: 1554-8627            Impact factor:   16.016


  1 in total

1.  Deficiencies in vesicular transport mediated by TRAPPC4 are associated with severe syndromic intellectual disability.

Authors:  Nicole J Van Bergen; Yiran Guo; Noraldin Al-Deri; Zhanna Lipatova; Daniela Stanga; Sarah Zhao; Rakhilya Murtazina; Valeriya Gyurkovska; Davut Pehlivan; Tadahiro Mitani; Alper Gezdirici; Jayne Antony; Felicity Collins; Mary J H Willis; Zeynep H Coban Akdemir; Pengfei Liu; Jaya Punetha; Jill V Hunter; Shalini N Jhangiani; Jawid M Fatih; Jill A Rosenfeld; Jennifer E Posey; Richard A Gibbs; Ender Karaca; Sean Massey; Thisara G Ranasinghe; Patrick Sleiman; Chris Troedson; James R Lupski; Michael Sacher; Nava Segev; Hakon Hakonarson; John Christodoulou
Journal:  Brain       Date:  2020-01-01       Impact factor: 13.501

  1 in total
  5 in total

1.  Biallelic in-frame deletion in TRAPPC4 in a family with developmental delay and cerebellar atrophy.

Authors:  Ahmed K Saad; Dana Marafi; Tadahiro Mitani; Angad Jolly; Haowei Du; Hasnaa M Elbendary; Shalini N Jhangiani; Zeynep C Akdemir; Richard A Gibbs; Jill V Hunter; Claudia M B C Carvalho; Davut Pehlivan; Jennifer E Posey; Maha S Zaki; James R Lupski
Journal:  Brain       Date:  2020-10-01       Impact factor: 13.501

2.  Evidence that conserved essential genes are enriched for pro-longevity factors.

Authors:  Naci Oz; Elena M Vayndorf; Mitsuhiro Tsuchiya; Samantha McLean; Lesly Turcios-Hernandez; Jason N Pitt; Benjamin W Blue; Michael Muir; Michael G Kiflezghi; Alexander Tyshkovskiy; Alexander Mendenhall; Matt Kaeberlein; Alaattin Kaya
Journal:  Geroscience       Date:  2022-06-13       Impact factor: 7.581

3.  The substrate specificity of the human TRAPPII complex's Rab-guanine nucleotide exchange factor activity.

Authors:  Meredith L Jenkins; Noah J Harris; Udit Dalwadi; Kaelin D Fleming; Daniel S Ziemianowicz; Atefeh Rafiei; Emily M Martin; David C Schriemer; Calvin K Yip; John E Burke
Journal:  Commun Biol       Date:  2020-12-04

4.  Novel Compound Heterozygous Mutation in TRAPPC9 Gene: The Relevance of Whole Genome Sequencing.

Authors:  Maria Isabel Alvarez-Mora; Jordi Corominas; Christian Gilissen; Aurora Sanchez; Irene Madrigal; Laia Rodriguez-Revenga
Journal:  Genes (Basel)       Date:  2021-04-12       Impact factor: 4.096

Review 5.  Yeast as a Tool to Understand the Significance of Human Disease-Associated Gene Variants.

Authors:  Tiziana Cervelli; Alvaro Galli
Journal:  Genes (Basel)       Date:  2021-08-24       Impact factor: 4.096

  5 in total

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