Literature DB >> 32109415

A Quantitative Tissue-Specific Landscape of Protein Redox Regulation during Aging.

Haopeng Xiao1, Mark P Jedrychowski1, Devin K Schweppe2, Edward L Huttlin2, Qing Yu2, David E Heppner3, Jiaming Li2, Jiani Long4, Evanna L Mills1, John Szpyt2, Zhixiang He5, Guangyan Du5, Ryan Garrity6, Anita Reddy1, Laura Pontano Vaites2, Joao A Paulo2, Tinghu Zhang3, Nathanael S Gray3, Steven P Gygi2, Edward T Chouchani7.   

Abstract

Mammalian tissues engage in specialized physiology that is regulated through reversible modification of protein cysteine residues by reactive oxygen species (ROS). ROS regulate a myriad of biological processes, but the protein targets of ROS modification that drive tissue-specific physiology in vivo are largely unknown. Here, we develop Oximouse, a comprehensive and quantitative mapping of the mouse cysteine redox proteome in vivo. We use Oximouse to establish several paradigms of physiological redox signaling. We define and validate cysteine redox networks within each tissue that are tissue selective and underlie tissue-specific biology. We describe a common mechanism for encoding cysteine redox sensitivity by electrostatic gating. Moreover, we comprehensively identify redox-modified disease networks that remodel in aged mice, establishing a systemic molecular basis for the long-standing proposed links between redox dysregulation and tissue aging. We provide the Oximouse compendium as a framework for understanding mechanisms of redox regulation in physiology and aging.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ROS; aging; cysteine; proteomics; reactive oxygen species

Mesh:

Substances:

Year:  2020        PMID: 32109415      PMCID: PMC8164166          DOI: 10.1016/j.cell.2020.02.012

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  72 in total

Review 1.  Cysteine reactivity across the subcellular universe.

Authors:  Daniel W Bak; Tyler J Bechtel; Julia A Falco; Eranthie Weerapana
Journal:  Curr Opin Chem Biol       Date:  2018-11-30       Impact factor: 8.822

2.  Quantifying the global cellular thiol-disulfide status.

Authors:  Rosa E Hansen; Doris Roth; Jakob R Winther
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-02       Impact factor: 11.205

Review 3.  The hallmarks of aging.

Authors:  Carlos López-Otín; Maria A Blasco; Linda Partridge; Manuel Serrano; Guido Kroemer
Journal:  Cell       Date:  2013-06-06       Impact factor: 41.582

4.  Identification and quantification of protein S-nitrosation by nitrite in the mouse heart during ischemia.

Authors:  Edward T Chouchani; Andrew M James; Carmen Methner; Victoria R Pell; Tracy A Prime; Brian K Erickson; Marleen Forkink; Gigi Y Lau; Thomas P Bright; Katja E Menger; Ian M Fearnley; Thomas Krieg; Michael P Murphy
Journal:  J Biol Chem       Date:  2017-07-14       Impact factor: 5.157

5.  The PRIDE database and related tools and resources in 2019: improving support for quantification data.

Authors:  Yasset Perez-Riverol; Attila Csordas; Jingwen Bai; Manuel Bernal-Llinares; Suresh Hewapathirana; Deepti J Kundu; Avinash Inuganti; Johannes Griss; Gerhard Mayer; Martin Eisenacher; Enrique Pérez; Julian Uszkoreit; Julianus Pfeuffer; Timo Sachsenberg; Sule Yilmaz; Shivani Tiwary; Jürgen Cox; Enrique Audain; Mathias Walzer; Andrew F Jarnuczak; Tobias Ternent; Alvis Brazma; Juan Antonio Vizcaíno
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

6.  UniProt: a worldwide hub of protein knowledge.

Authors: 
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

7.  GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists.

Authors:  Eran Eden; Roy Navon; Israel Steinfeld; Doron Lipson; Zohar Yakhini
Journal:  BMC Bioinformatics       Date:  2009-02-03       Impact factor: 3.169

8.  Accumulation of succinate controls activation of adipose tissue thermogenesis.

Authors:  Evanna L Mills; Kerry A Pierce; Mark P Jedrychowski; Ryan Garrity; Sally Winther; Sara Vidoni; Takeshi Yoneshiro; Jessica B Spinelli; Gina Z Lu; Lawrence Kazak; Alexander S Banks; Marcia C Haigis; Shingo Kajimura; Michael P Murphy; Steven P Gygi; Clary B Clish; Edward T Chouchani
Journal:  Nature       Date:  2018-07-18       Impact factor: 49.962

9.  Direct cysteine sulfenylation drives activation of the Src kinase.

Authors:  David E Heppner; Christopher M Dustin; Chenyi Liao; Milena Hristova; Carmen Veith; Andrew C Little; Bethany A Ahlers; Sheryl L White; Bin Deng; Ying-Wai Lam; Jianing Li; Albert van der Vliet
Journal:  Nat Commun       Date:  2018-10-30       Impact factor: 14.919

10.  Cardioprotection by S-nitrosation of a cysteine switch on mitochondrial complex I.

Authors:  Edward T Chouchani; Carmen Methner; Sergiy M Nadtochiy; Angela Logan; Victoria R Pell; Shujing Ding; Andrew M James; Helena M Cochemé; Johannes Reinhold; Kathryn S Lilley; Linda Partridge; Ian M Fearnley; Alan J Robinson; Richard C Hartley; Robin A J Smith; Thomas Krieg; Paul S Brookes; Michael P Murphy
Journal:  Nat Med       Date:  2013-05-26       Impact factor: 53.440

View more
  60 in total

Review 1.  The Pancreatic β-Cell: The Perfect Redox System.

Authors:  Petr Ježek; Blanka Holendová; Martin Jabůrek; Jan Tauber; Andrea Dlasková; Lydie Plecitá-Hlavatá
Journal:  Antioxidants (Basel)       Date:  2021-01-29

2.  Heterogeneous adaptation of cysteine reactivity to a covalent oncometabolite.

Authors:  Minervo Perez; Daniel W Bak; Sarah E Bergholtz; Daniel R Crooks; Bhargav Srinivas Arimilli; Youfeng Yang; Eranthie Weerapana; W Marston Linehan; Jordan L Meier
Journal:  J Biol Chem       Date:  2020-08-19       Impact factor: 5.157

3.  A quantitative thiol reactivity profiling platform to analyze redox and electrophile reactive cysteine proteomes.

Authors:  Ling Fu; Zongmin Li; Keke Liu; Caiping Tian; Jixiang He; Jingyang He; Fuchu He; Ping Xu; Jing Yang
Journal:  Nat Protoc       Date:  2020-07-20       Impact factor: 13.491

4.  An energetics perspective on geroscience: mitochondrial protonmotive force and aging.

Authors:  Brandon J Berry; Matt Kaeberlein
Journal:  Geroscience       Date:  2021-04-17       Impact factor: 7.713

5.  Spatiotemporal evaluation of the mouse embryonic redox environment and histiotrophic nutrition following treatment with valproic acid and 1,2-dithiole-3-thione during early organogenesis.

Authors:  Samantha Lapehn; Ted B Piorczynski; Jason M Hansen; Craig Harris
Journal:  Reprod Toxicol       Date:  2021-03-10       Impact factor: 3.143

Review 6.  Discovering the landscape of protein modifications.

Authors:  E Keith Keenan; Derek K Zachman; Matthew D Hirschey
Journal:  Mol Cell       Date:  2021-04-01       Impact factor: 17.970

7.  Profibrotic epithelial TGF-β1 signaling involves NOX4-mitochondria cross talk and redox-mediated activation of the tyrosine kinase FYN.

Authors:  Carmen Veith; Milena Hristova; Karamatullah Danyal; Aida Habibovic; Christopher M Dustin; John E McDonough; Bart M Vanaudenaerde; Michael Kreuter; Marc A Schneider; Nicolas Kahn; Frederik J van Schooten; Agnes W Boots; Albert van der Vliet
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2020-12-16       Impact factor: 5.464

Review 8.  Characterization of cellular oxidative stress response by stoichiometric redox proteomics.

Authors:  Tong Zhang; Matthew J Gaffrey; Xiaolu Li; Wei-Jun Qian
Journal:  Am J Physiol Cell Physiol       Date:  2020-12-02       Impact factor: 4.249

Review 9.  Contemporary proteomic strategies for cysteine redoxome profiling.

Authors:  Patrick Willems; Frank Van Breusegem; Jingjing Huang
Journal:  Plant Physiol       Date:  2021-05-27       Impact factor: 8.340

Review 10.  Cancer metabolism: looking forward.

Authors:  Inmaculada Martínez-Reyes; Navdeep S Chandel
Journal:  Nat Rev Cancer       Date:  2021-07-16       Impact factor: 60.716

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.