Literature DB >> 32108467

Classification of Flavonoid Metabolomes via Data Mining and Quantification of Hydroxyl NMR Signals.

Yang Yu, Guido F Pauli, Lingyi Huang, Li-She Gan1, Richard B van Breemen, Dianpeng Li2, James B McAlpine, David C Lankin, Shao-Nong Chen.   

Abstract

Utilizing the distinct HMBC cross-peak patterns of lower-field range (LFR; 11.80-14.20 ppm) hydroxyl singlets, presented NMR methodology characterizes flavonoid metabolomes both qualitatively and quantitatively. It enables simultaneous classification of the structural types of 5-OH flavonoids and biogenetically related 2'-OH chalcones, as well as quantification of individual metabolites from 1H NMR spectra, even in complex mixtures. Initially, metabolite-specific LFR 1D 1H and 2D HMBC patterns were established via literature mining and experimental data interpretation, demonstrating that LFR HMBC patterns encode the different structural types of 5-OH flavonoids/2'-OH chalcones. Taking advantage of the simplistic multiplicity of the H,H-uncoupled LFR 5-/2'-OH singlets, individual metabolites could subsequently be quantified by peak fitting quantitative 1H NMR (PF-qHNMR). Metabolomic analysis of enriched fractions from three medicinal licorice (Glycyrrhiza) species established proof-of-concept for distinguishing three major structural types and eight subtypes in biomedical applications. The method identified 15 G. uralensis (GU) phenols from the six possible subtypes of 5,7-diOH (iso)flav(an)ones with 6-, 8-, and nonprenyl substitution, including the new 6-prenyl-licoisoflavanone (1) and two previously unknown compounds (4 and 7). Relative (100%) qNMR established quantitative metabolome patterns suitable for species discrimination and plant metabolite studies. Absolute qNMR with combined external and internal (solvent) calibration (ECIC) identified and quantified 158 GU metabolites. HMBC-supported qHNMR analysis of flavonoid metabolomes ("flavonomics") empowers the exploration of structure-abundance-activity relationships of designated bioactivity. Its ability to identify and quantify numerous metabolites simultaneously and without identical reference materials opens new avenues for natural product discovery and botanical quality control and can be adopted to other flavonoid- and chalcone-containing taxa.

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Year:  2020        PMID: 32108467      PMCID: PMC7442116          DOI: 10.1021/acs.analchem.9b05084

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  36 in total

1.  [Study on chemical constituents of Scutelliaria regeliana].

Authors:  Jinlan Wang; Baoying Zhao; Hongmei Xu; Ming Zhao; Wanxia Tang; Shujun Zhang
Journal:  Zhongguo Zhong Yao Za Zhi       Date:  2011-12

2.  Structure and formation of the fluorescent compound of Lignum nephriticum.

Authors:  A Ulises Acuña; Francisco Amat-Guerri; Purificación Morcillo; Marta Liras; Benjamín Rodríguez
Journal:  Org Lett       Date:  2009-07-16       Impact factor: 6.005

3.  Phenolics from Glycyrrhiza glabra roots and their PPAR-gamma ligand-binding activity.

Authors:  Minpei Kuroda; Yoshihiro Mimaki; Shinichi Honda; Hozumi Tanaka; Shinichi Yokota; Tatsumasa Mae
Journal:  Bioorg Med Chem       Date:  2009-11-26       Impact factor: 3.641

4.  Determination of Polyphenolic Phytochemicals using Highly Deshielded -OH 1 H-NMR Signals.

Authors:  Pantelis Charisiadis; Vassiliki G Kontogianni; Constantinos G Tsiafoulis; Andreas G Tzakos; Ioannis P Gerothanassis
Journal:  Phytochem Anal       Date:  2016-12-15       Impact factor: 3.373

5.  Species-specific Standardisation of Licorice by Metabolomic Profiling of Flavanones and Chalcones.

Authors:  Charlotte Simmler; Tristesse Jones; Jeffrey R Anderson; Dejan C Nikolić; Richard B van Breemen; Djaja D Soejarto; Shao-Nong Chen; Guido F Pauli
Journal:  Phytochem Anal       Date:  2013-11-13       Impact factor: 3.373

6.  Isoflavonoids and other compounds from Psorothamnus arborescens with antiprotozoal activities.

Authors:  Manar M Salem; Karl A Werbovetz
Journal:  J Nat Prod       Date:  2006-01       Impact factor: 4.050

7.  A new coumestan from Tephrosia calophylla.

Authors:  Pennaka Hari Kishore; Mopuru Vijaya Bhaskar Reddy; Duvvuru Gunasekar; Madugula Marthanda Murthy; Cristelle Caux; Bernard Bodo
Journal:  Chem Pharm Bull (Tokyo)       Date:  2003-02       Impact factor: 1.645

8.  Solvent signal as an NMR concentration reference.

Authors:  Huaping Mo; Daniel Raftery
Journal:  Anal Chem       Date:  2008-12-15       Impact factor: 6.986

9.  NMR in metabolomics and natural products research: two sides of the same coin.

Authors:  Steven L Robinette; Rafael Brüschweiler; Frank C Schroeder; Arthur S Edison
Journal:  Acc Chem Res       Date:  2011-09-02       Impact factor: 22.384

Review 10.  Two elephants in the room: new hybrid nuclear magnetic resonance and mass spectrometry approaches for metabolomics.

Authors:  Kerem Bingol; Rafael Brüschweiler
Journal:  Curr Opin Clin Nutr Metab Care       Date:  2015-09       Impact factor: 4.294

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  2 in total

Review 1.  Metabolomics and health: from nutritional crops and plant-based pharmaceuticals to profiling of human biofluids.

Authors:  Andrey S Marchev; Liliya V Vasileva; Kristiana M Amirova; Martina S Savova; Zhivka P Balcheva-Sivenova; Milen I Georgiev
Journal:  Cell Mol Life Sci       Date:  2021-08-19       Impact factor: 9.261

2.  Polypharmacology-based approach for screening TCM against coinfection of Mycoplasma gallisepticum and Escherichia coli.

Authors:  Jiaxin Bao; Yuan Wang; Shun Wang; Dong Niu; Ze Wang; Rui Li; Yadan Zheng; Muhammad Ishfaq; Zhiyong Wu; Jichang Li
Journal:  Front Vet Sci       Date:  2022-09-26
  2 in total

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