Literature DB >> 32108289

Whole-Genome Sequencing of Aspergillus terreus Species Complex.

Mathangi Palanivel1, Micheál Mac Aogáin1, Rikky W Purbojati2, Akira Uchida2, Ngu War Aung2, Serene B Y Lim2, Alexander Putra2, Daniela I Drautz-Moses2, Shila Seaton3, Thomas R Rogers4, Stephan C Schuster2, Sanjay H Chotirmall5.   

Abstract

Aspergillus terreus species complex is an opportunistic fungal pathogen increasingly implicated in invasive infection, as well as chronic respiratory disease. Currently, an understanding of A. terreus pathogenicity is impeded by a limited number of whole-genome sequences of this fungal pathogen. We here describe a high-quality whole-genome assembly of European A. terreus clinical isolate M6925, derived by single-molecule real-time sequencing with short-read polishing.

Entities:  

Keywords:  Aspergillus terreus; Genome; Sequence

Mesh：

Year:  2020        PMID： 32108289     DOI： 10.1007/s11046-020-00433-0

Source DB:  PubMed          Journal:  Mycopathologia        ISSN： 0301-486X            Impact factor:   2.574


  13 in total

1.  Comparison of six extraction techniques for isolation of DNA from filamentous fungi.

Authors:  J A van Burik; R W Schreckhise; T C White; R A Bowden; D Myerson
Journal:  Med Mycol       Date:  1998-10       Impact factor: 4.076

2.  MycopathologiaGENOMES: The New 'Home' for the Publication of Fungal Genomes.

Authors:  Micheál Mac Aogáin; Vishnu Chaturvedi; Sanjay H Chotirmall
Journal:  Mycopathologia       Date:  2019-08-10       Impact factor: 2.574

3.  Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data.

Authors:  Chen-Shan Chin; David H Alexander; Patrick Marks; Aaron A Klammer; James Drake; Cheryl Heiner; Alicia Clum; Alex Copeland; John Huddleston; Evan E Eichler; Stephen W Turner; Jonas Korlach
Journal:  Nat Methods       Date:  2013-05-05       Impact factor: 28.547

4.  Epidemiology and outcome of infections due to Aspergillus terreus: 10-year single centre experience.

Authors:  Cornelia Lass-Flörl; Katharina Griff; Astrid Mayr; Andreas Petzer; Günter Gastl; Hugo Bonatti; Martin Freund; Gabriele Kropshofer; Manfred P Dierich; David Nachbaur
Journal:  Br J Haematol       Date:  2005-10       Impact factor: 6.998

Review 5.  Aspergillus fumigatus and related species.

Authors:  Janyce A Sugui; Kyung J Kwon-Chung; Praveen R Juvvadi; Jean-Paul Latgé; William J Steinbach
Journal:  Cold Spring Harb Perspect Med       Date:  2014-11-06       Impact factor: 6.915

6.  A prospective international Aspergillus terreus survey: an EFISG, ISHAM and ECMM joint study.

Authors:  B Risslegger; T Zoran; M Lackner; M Aigner; F Sánchez-Reus; A Rezusta; A Chowdhary; S J Taj-Aldeen; M C Arendrup; S Oliveri; D P Kontoyiannis; A Alastruey-Izquierdo; K Lagrou; G Lo Cascio; J F Meis; W Buzina; C Farina; M Drogari-Apiranthitou; A Grancini; A M Tortorano; B Willinger; A Hamprecht; E Johnson; L Klingspor; V Arsic-Arsenijevic; O A Cornely; J Meletiadis; W Prammer; V Tullio; J-J Vehreschild; L Trovato; R E Lewis; E Segal; P-M Rath; P Hamal; M Rodriguez-Iglesias; E Roilides; S Arikan-Akdagli; A Chakrabarti; A L Colombo; M S Fernández; M T Martin-Gomez; H Badali; G Petrikkos; N Klimko; S M Heimann; J Houbraken; O Uzun; M Edlinger; S de la Fuente; C Lass-Flörl
Journal:  Clin Microbiol Infect       Date:  2017-04-13       Impact factor: 8.067

7.  Invasive aspergillosis caused by Aspergillus terreus: an emerging opportunistic infection with poor outcome independent of azole therapy.

Authors:  Ray Hachem; Marisa Zenaide Ribeiro Gomes; Gilbert El Helou; Aline El Zakhem; Christelle Kassis; Elizabeth Ramos; Ying Jiang; Anne-Marie Chaftari; Issam I Raad
Journal:  J Antimicrob Chemother       Date:  2014-07-08       Impact factor: 5.790

Review 8.  The emergence of Aspergillus species in chronic respiratory disease.

Authors:  Anthony Ca Yii; Mariko S Koh; Therese S Lapperre; Gan L Tan; Sanjay H Chotirmall
Journal:  Front Biosci (Schol Ed)       Date:  2017-01-01

9.  The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources.

Authors:  Martha B Arnaud; Gustavo C Cerqueira; Diane O Inglis; Marek S Skrzypek; Jonathan Binkley; Marcus C Chibucos; Jonathan Crabtree; Clinton Howarth; Joshua Orvis; Prachi Shah; Farrell Wymore; Gail Binkley; Stuart R Miyasato; Matt Simison; Gavin Sherlock; Jennifer R Wortman
Journal:  Nucleic Acids Res       Date:  2011-11-12       Impact factor: 16.971

10.  Complete Genome Sequence of Soil Fungus Aspergillus terreus (KM017963), a Potent Lovastatin Producer.

Authors:  Janakiraman Savitha; S D Bhargavi; V K Praveen
Journal:  Genome Announc       Date:  2016-06-09
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  3 in total

Review 1.  Respiratory Mycoses in COPD and Bronchiectasis.

Authors:  Pei Yee Tiew; Micheál Mac Aogáin; Soo Kai Ter; Stefano Aliberti; James D Chalmers; Sanjay H Chotirmall
Journal:  Mycopathologia       Date:  2021-03-11       Impact factor: 2.574

Review 2.  Clinical Aspergillus Signatures in COPD and Bronchiectasis.

Authors:  Pei Yee Tiew; Kai Xian Thng; Sanjay H Chotirmall
Journal:  J Fungi (Basel)       Date:  2022-05-05

3.  Complete genome sequence of lovastatin producer Aspergillus terreus ATCC 20542 and evaluation of genomic diversity among A. terreus strains.

Authors:  Małgorzata Ryngajłło; Tomasz Boruta; Marcin Bizukojć
Journal:  Appl Microbiol Biotechnol       Date:  2021-01-30       Impact factor: 4.813
  3 in total

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