Literature DB >> 32096074

Disrupting Fluorescence by Mutagenesis in a Green Fluorescent Fatty Acid Binding Protein from a Marine Eel.

Sara Rose Krivoshik1,2, Andrew M Guarnaccia1,2, Daniel B Fried3, David F Gruber1,2, Jean P Gaffney4,5.   

Abstract

Biofluorescence has been found to be an increasingly widespread phenomenon in the ocean. The reclusive Caribbean chlopsid eel, Kaupichthys hyoproroides displays bright green fluorescence in its native marine environment. We have previously shown the fluorescence to be attributed to a fluorescent fatty acid-binding protein, Chlopsid FP, part of a larger family of fluorescent fatty acid-binding proteins, including the homologous UnaG. All require the addition of exogenous bilirubin for fluorescence. Here, we report the generation of a series of point mutants, and deletions that result in the quenching of fluorescence in Chlopsid FP. In addition, we report the binding constants of bilirubin to Chlopsid FP and mutants, measured by fluorescence titration. This study provides key insights into the potential mechanism of fluorescence in this class of fluorescent fatty acid-binding proteins.

Entities:  

Keywords:  Bilirubin; Chlopsid FP; Eel; Fatty acid-binding proteins; Green fluorescence

Year:  2020        PMID: 32096074     DOI: 10.1007/s10930-020-09883-3

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  27 in total

1.  Fluorescence polarization of green fluorescence protein.

Authors:  Shinya Inoué; Osamu Shimomura; Makoto Goda; Mykhailo Shribak; P T Tran
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-02       Impact factor: 11.205

2.  A bilirubin-inducible fluorescent protein from eel muscle.

Authors:  Akiko Kumagai; Ryoko Ando; Hideyuki Miyatake; Peter Greimel; Toshihide Kobayashi; Yoshio Hirabayashi; Tomomi Shimogori; Atsushi Miyawaki
Journal:  Cell       Date:  2013-06-13       Impact factor: 41.582

3.  Ubiquitous distribution of fluorescent protein in muscles of four species and two subspecies of eel (genus Anguilla).

Authors:  Aki Funahashi; Takao Itakura; A I Hassanin Abeer; Masaharu Komatsu; Seiichi Hayashi; Yoshio Kaminishi
Journal:  J Genet       Date:  2017-03       Impact factor: 1.166

Review 4.  The multigene family of fatty acid-binding proteins (FABPs): function, structure and polymorphism.

Authors:  Agata Chmurzyńska
Journal:  J Appl Genet       Date:  2006       Impact factor: 3.240

5.  Two Distinct Fluorescence States of the Ligand-Induced Green Fluorescent Protein UnaG.

Authors:  Yoh Shitashima; Togo Shimozawa; Akiko Kumagai; Atsushi Miyawaki; Toru Asahi
Journal:  Biophys J       Date:  2017-12-19       Impact factor: 4.033

6.  A dual-ligand-modulable fluorescent protein based on UnaG and calmodulin.

Authors:  Yoh Shitashima; Togo Shimozawa; Toru Asahi; Atsushi Miyawaki
Journal:  Biochem Biophys Res Commun       Date:  2018-02-01       Impact factor: 3.575

7.  A Novel Fluorescence-Based Assay for the Measurement of Biliverdin Reductase Activity.

Authors:  Samuel O Adeosun; Kyle H Moore; David M Lang; Assumpta C Nwaneri; Terry D Hinds; David E Stec
Journal:  React Oxyg Species (Apex)       Date:  2018-01-01

8.  A guide to simple and informative binding assays.

Authors:  Thomas D Pollard
Journal:  Mol Biol Cell       Date:  2010-12       Impact factor: 4.138

9.  Modeling protein quaternary structure of homo- and hetero-oligomers beyond binary interactions by homology.

Authors:  Martino Bertoni; Florian Kiefer; Marco Biasini; Lorenza Bordoli; Torsten Schwede
Journal:  Sci Rep       Date:  2017-09-05       Impact factor: 4.379

10.  The covert world of fish biofluorescence: a phylogenetically widespread and phenotypically variable phenomenon.

Authors:  John S Sparks; Robert C Schelly; W Leo Smith; Matthew P Davis; Dan Tchernov; Vincent A Pieribone; David F Gruber
Journal:  PLoS One       Date:  2014-01-08       Impact factor: 3.240

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