Literature DB >> 32092528

Awakening the dark side: retrotransposon activation in neurodegenerative disorders.

Elizabeth Ochoa Thomas1, Gabbe Zuniga1, Wenyan Sun1, Bess Frost2.   

Abstract

Nearly half (45%) of the human genome is composed of transposable elements, or 'jumping genes'. Since Barbara McClintock's original discovery of transposable elements in 1950, we have come to appreciate that transposable element mobilization is a major driver of evolution that transposons are active in the germline and the soma, and that transposable element dysregulation is causally associated with many human disorders. In the present review, we highlight recent studies investigating transposable element activation in the adult brain and in the context of neurodegeneration. Collectively, these studies contribute to a greater understanding of the frequency of complete retrotransposition in the adult brain as well as the presence of transposable element-derived RNA and protein in brain and fluids of patients with neurodegenerative disorders. We discuss therapeutic opportunities and speculate on the larger implications of transposable element activation in regard to current hot topics in the field of neurodegeneration.
Copyright © 2020 Elsevier Ltd. All rights reserved.

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Year:  2020        PMID: 32092528      PMCID: PMC7198348          DOI: 10.1016/j.conb.2020.01.012

Source DB:  PubMed          Journal:  Curr Opin Neurobiol        ISSN: 0959-4388            Impact factor:   6.627


  56 in total

1.  DNA-Demethylating Agents Target Colorectal Cancer Cells by Inducing Viral Mimicry by Endogenous Transcripts.

Authors:  David Roulois; Helen Loo Yau; Rajat Singhania; Yadong Wang; Arnavaz Danesh; Shu Yi Shen; Han Han; Gangning Liang; Peter A Jones; Trevor J Pugh; Catherine O'Brien; Daniel D De Carvalho
Journal:  Cell       Date:  2015-08-27       Impact factor: 41.582

2.  Somatic mosaicism in neuronal precursor cells mediated by L1 retrotransposition.

Authors:  Alysson R Muotri; Vi T Chu; Maria C N Marchetto; Wei Deng; John V Moran; Fred H Gage
Journal:  Nature       Date:  2005-06-16       Impact factor: 49.962

3.  Transcriptome-wide piRNA profiling in human brains of Alzheimer's disease.

Authors:  Wenying Qiu; Xiaoyun Guo; Xiandong Lin; Qian Yang; Wanying Zhang; Yong Zhang; Lingjun Zuo; Yong Zhu; Chiang-Shan R Li; Chao Ma; Xingguang Luo
Journal:  Neurobiol Aging       Date:  2017-06-03       Impact factor: 4.673

Review 4.  Regulatory activities of transposable elements: from conflicts to benefits.

Authors:  Edward B Chuong; Nels C Elde; Cédric Feschotte
Journal:  Nat Rev Genet       Date:  2016-11-21       Impact factor: 53.242

5.  Updated TDP-43 in Alzheimer's disease staging scheme.

Authors:  Keith A Josephs; Melissa E Murray; Jennifer L Whitwell; Nirubol Tosakulwong; Stephen D Weigand; Leonard Petrucelli; Amanda M Liesinger; Ronald C Petersen; Joseph E Parisi; Dennis W Dickson
Journal:  Acta Neuropathol       Date:  2016-01-25       Impact factor: 17.088

6.  Effect of reverse transcriptase inhibitors on LINE-1 and Ty1 reverse transcriptase activities and on LINE-1 retrotransposition.

Authors:  Lixin Dai; Qing Huang; Jef D Boeke
Journal:  BMC Biochem       Date:  2011-05-05       Impact factor: 4.059

7.  Somatic retrotransposition alters the genetic landscape of the human brain.

Authors:  J Kenneth Baillie; Mark W Barnett; Kyle R Upton; Daniel J Gerhardt; Todd A Richmond; Fioravante De Sapio; Paul M Brennan; Patrizia Rizzu; Sarah Smith; Mark Fell; Richard T Talbot; Stefano Gustincich; Thomas C Freeman; John S Mattick; David A Hume; Peter Heutink; Piero Carninci; Jeffrey A Jeddeloh; Geoffrey J Faulkner
Journal:  Nature       Date:  2011-10-30       Impact factor: 49.962

8.  Repetitive element transcripts are elevated in the brain of C9orf72 ALS/FTLD patients.

Authors:  Mercedes Prudencio; Patrick K Gonzales; Casey N Cook; Tania F Gendron; Lillian M Daughrity; Yuping Song; Mark T W Ebbert; Marka van Blitterswijk; Yong-Jie Zhang; Karen Jansen-West; Matthew C Baker; Michael DeTure; Rosa Rademakers; Kevin B Boylan; Dennis W Dickson; Leonard Petrucelli; Christopher D Link
Journal:  Hum Mol Genet       Date:  2017-09-01       Impact factor: 6.150

9.  Loss of Nuclear TDP-43 Is Associated with Decondensation of LINE Retrotransposons.

Authors:  Elaine Y Liu; Jenny Russ; Christopher P Cali; Jessica M Phan; Alexandre Amlie-Wolf; Edward B Lee
Journal:  Cell Rep       Date:  2019-04-30       Impact factor: 9.423

10.  Epigenome-wide study uncovers large-scale changes in histone acetylation driven by tau pathology in aging and Alzheimer's human brains.

Authors:  David A Bennett; Philip L De Jager; Hans-Ulrich Klein; Cristin McCabe; Elizabeta Gjoneska; Sarah E Sullivan; Belinda J Kaskow; Anna Tang; Robert V Smith; Jishu Xu; Andreas R Pfenning; Bradley E Bernstein; Alexander Meissner; Julie A Schneider; Sara Mostafavi; Li-Huei Tsai; Tracy L Young-Pearse
Journal:  Nat Neurosci       Date:  2018-12-17       Impact factor: 24.884

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  4 in total

1.  A retrotransposon storm marks clinical phenoconversion to late-onset Alzheimer's disease.

Authors:  Fabio Macciardi; Maria Giulia Bacalini; Ricardo Miramontes; Alessio Boattini; Cristian Taccioli; Giorgia Modenini; Rond Malhas; Laura Anderlucci; Yuriy Gusev; Thomas J Gross; Robert M Padilla; Massimo S Fiandaca; Elizabeth Head; Guia Guffanti; Howard J Federoff; Mark Mapstone
Journal:  Geroscience       Date:  2022-05-19       Impact factor: 7.581

2.  Immune-mediated neurodegenerative trait provoked by multimodal derepression of long-interspersed nuclear element-1.

Authors:  Fumio Takahashi; Chenyang Zhang; Hirohiko Hohjoh; Ben Raveney; Takashi Yamamura; Nobuhiro Hayashi; Shinji Oki
Journal:  iScience       Date:  2022-04-22

3.  Neuron-specific chromosomal megadomain organization is adaptive to recent retrotransposon expansions.

Authors:  Sandhya Chandrasekaran; Sergio Espeso-Gil; Yong-Hwee Eddie Loh; Behnam Javidfar; Bibi Kassim; Yueyan Zhu; Yuan Zhang; Yuhao Dong; Lucy K Bicks; Haixin Li; Prashanth Rajarajan; Cyril J Peter; Daijing Sun; Esperanza Agullo-Pascual; Marina Iskhakova; Molly Estill; Bluma J Lesch; Li Shen; Yan Jiang; Schahram Akbarian
Journal:  Nat Commun       Date:  2021-12-13       Impact factor: 14.919

Review 4.  HSV-1 and Endogenous Retroviruses as Risk Factors in Demyelination.

Authors:  Raquel Bello-Morales; Sabina Andreu; Inés Ripa; José Antonio López-Guerrero
Journal:  Int J Mol Sci       Date:  2021-05-27       Impact factor: 5.923

  4 in total

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