| Literature DB >> 32088091 |
Saurabh Kumar1, Shweta Modgil1, Sridhar Bammidi1, Gillipsie Minhas1, Richa Shri2, Sushmita Kaushik3, Varinder Singh2, Akshay Anand4.
Abstract
BACKGROUND: Repeated failure to rescue the damaged retinal ganglion cells (RGCs) by various drugs has warranted the need to screen common herbal compounds available in the form of various eye formulations for their efficacy.Entities:
Keywords: Allium cepa; Ischemia/reperfusion; Neuroprotection; Retinal ischemia
Year: 2020 PMID: 32088091 PMCID: PMC7772493 DOI: 10.1016/j.jaim.2019.08.002
Source DB: PubMed Journal: J Ayurveda Integr Med ISSN: 0975-9476
Fig. 1Schematic representation of the experimental plan.
Primer sequence for different marker genes used in real-time PCR.
| Target Gene | Primer Sequence (5′→3′) |
|---|---|
| Brn3b | F: GCAGTCTCCACTTGGTGCTTACTC |
| BCl-2 | F: GCCCTTCGGAGTTTAATCAG |
| GFAP | F: ACAGACTTTCTCCAACCTCCAG |
| GDNF | F: TGGGCTATGAAACCAAGGAG |
| B-actin | F: AGCCATGTACGTAGCCATCC |
Fig. 2Fold change in the gene expression of Brn3b for injury and 300 mg/kg A. cepa group estimated through Real Time PCR analysis for 7-day, 14-day, and 28-day after PPA surgery in ipsilateral eye. The values were normalized against the endogenous control (β-Actin) (n = 3). The data was found to be significant at P ≤ .05 (* = .022).
Fig. 3Fold change in the BCl-2 mRNA expression for injury and 300 mg/kg A. cepa group estimated through Real Time PCR analysis at 7, 14, and 28 day after PPA surgery in ipsilateral eye. The values were normalized against the endogenous control (β-Actin) (n = 3). The data was found to be significant at P ≤ .05 (# = <.001).
Fig. 4Fold change in the gene expression of GFAP (Glial Fibrillary Acidic protein) for injury and 300 mg/kg A. cepa group estimated through Real Time PCR analysis for 7-day, 14-day, and 28-day after PPA surgery in ipsilateral eye. The values were normalized against the endogenous control (β-Actin) (n = 3). The data was found to be significant at P ≤ .05 (# = ≤.001).
Real-Time PCR data mean, S.D + S.E, P-Value for BCl-2, Brn3b, GFAP, and GDNF genes at different time points (7-day, 14-day, and 28-day). The values were normalized against absolute controls. The P-values are indicated with respect to the normal control. The data was found to be statistically significant at P ≤ .05
| Genes | Time Points | Injury Only (Group II) | Injury + 300 mg/kg pretreatment (Group III) | ||||
|---|---|---|---|---|---|---|---|
| Mean | SD+S.E | P-Value | Mean | SD+S.E. | P-value | ||
| BCl-2 | 7D | .418115 | .0911550 + .0372139 | <.001 | .198191 | .0463812 + .0189350 | <.001 |
| 14D | .291388 | .1748523 + .0713831 | .010 | .333727 | .2721050 + .1110864 | .030 | |
| 28D | .478668 | .2726384 + .136319 | .039 | .671248 | .2729234 + .1114205 | .002 | |
| Brn3b | 7D | .971327 | .4919620 + .28403 | .076 | .415720 | .0679446 + .02774 | <.001 |
| 14D | .432939 | .2897533 + .11829 | .015 | 1.135345 | 1.055326 + .47196 | .074 | |
| 28D | .621289 | .4941992 + .2471 | .087 | 1.465695 | .6634392 + .27085 | .003 | |
| GFAP | 7D | 1.47267 | .19378 + .13702 | .059 | 2.290373 | .55309 + .27655 | .004 |
| 14D | .26484 | .11359 + .04637 | .002 | 2.267443 | .33967 + .13867 | <.001 | |
| 28D | 3.48528 | 1.29944 + .64972 | .013 | 3.728287 | .71831 + .32124 | <.001 | |
| GDNF | 7D | 2.01358 | .9668 + .3947 | .004 | 1.056857 | .117665 + .0480 | <.001 |
| 14D | .22600 | .177815 + .0726 | .026 | 3.740277 | 2.743927 + 1.12020 | .021 | |
| 28D | 3.71870 | 6.292648 + 3.6331 | .414 | 3.812304 | .903641 + .45182 | .003 | |
Fig. 5Fold change in the gene expression of Glia derived Neurotrophic factor (GDNF) for injury and 300 mg/kg A. cepa group estimated through Real Time PCR analysis for 7-day, 14-day, and 28-day after PPA surgery in ipsilateral eye. The values were normalized against the endogenous control (β-Actin) (n = 3). The data was found to be significant at P ≤ .05 (* = .037, ¥ = .011).