| Literature DB >> 32087754 |
Anna Bajer1, Mohammed Alsarraf2, Dorota Dwużnik2, Ewa J Mierzejewska2, Marta Kołodziej-Sobocińska3, Jolanta Behnke-Borowczyk4, Łukasz Banasiak5, Maciej Grzybek6, Katarzyna Tołkacz2, Natalia Kartawik4, Łukasz Stańczak7, Patrycja Opalińska7, Małgorzata Krokowska-Paluszak7, Grzegorz Górecki7, Mustafa Alsarraf2, Jerzy M Behnke8.
Abstract
BACKGROUND: Rodents constitute an important part of the diet of many carnivore species. This predator-prey food chain is exploited by helminth parasites, such as cestodes, whose larval stages develop in rodents and then mature to the adult stage in predators. The main aim of our study was to use molecular techniques for identification of cestode species recovered from both intermediate and definitive hosts, with a particular focus on the genus Mesocestoides.Entities:
Keywords: Badger; Fox; Hydatigera; Lynx; Mesocestoides; Rodents; Taenia crassiceps
Year: 2020 PMID: 32087754 PMCID: PMC7036256 DOI: 10.1186/s13071-020-3961-2
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Origin (host species, region and site) and results of genotyping for larval and adult cestodes involved in the study
| Host group | Host ID | Host species | Region, site, year | Developmental stage, localization | Cestode species (morphological) | Cestode species (molecular) | GenBank ID | ||
|---|---|---|---|---|---|---|---|---|---|
| Rodents | 0005 | Masuria, U, 2018 | Larvae, PC | MN512706 | MN505192 | MN514024 | |||
| 0029 | Masuria, U, 2018 | Larvae, PC | MN512707 | MN505193 | MN514025 | ||||
| 0066 | Masuria, U, 2018 | Larvae, PC | MN401347 | MN505194 | MN514026 | ||||
| 0130 | Masuria, T, 2018 | Larvae, PC, Liv | MN401340 | MN505195 | MN514027 | ||||
| 00M3 | Masuria, U, 2001 | Larvae, PC | MN401345 | MN505196 | MN514028 | ||||
| 0177 | Masuria, T, 2018 | Larvae, Liv | nd | MN505197 | MN514029 | ||||
| 0D45 | Masuria, U, 2000 | Larvae, Liv | nd | MN505198 | MN514030 | ||||
| 0D53 | Masuria, U, 2000 | Larvae, PC | nd | nd | MN514031 | ||||
| D172 | Masuria, U, 2000 | Larvae, PC | nd | nd | MN514032 | ||||
| 0IS4 | Podlaskie, B, 2016 | Larvae, PC | MN401344 | MN505199 | MN514033 | ||||
| Canids | 0079 | Mazovia, J, 2017 | Adult, SI | MN401342 | MN505200 | MN514034 | |||
| 0125 | Kujawsko-Pomorskie, K, 2017 | Adult, SI | MN512708 | MN505201 | MN514035 | ||||
| 0138 | Kujawsko-Pomorskie, K, 2017 | Adult, SI | MN512709 | nd | MN514036 | ||||
| 0143 | Kujawsko-Pomorskie, K, 2017 | Adult, SI | MN401343 | MN505202 | MN514037 | ||||
| 0145 | Kujawsko-Pomorskie, K, 2017 | Adult, SI | MN512710 | nd | MN514038 | ||||
| 0146 | Kujawsko-Pomorskie, K, 2017 | Adult, SI | MN512711 | MN505203 | MN514039 | ||||
| 0321 | Łódzkie, Wo, 2018 | Adult, SI | MN401341 | MN505204 | MN514040 | ||||
| 0322 | Łódzkie, M, 2018 | Adult, SI | MN512712 | MN505205 | MN514041 | ||||
| 0280 | Mazovia, W, 2018 | Adult, SI | MN512713 | MN505206 | MN514042 | ||||
| Mustelids | 0366 | Masuria, Je, 2018 | Adult, SI | MN512714 | MN505207 | nd | |||
| 0367 | Masuria, Je, 2018 | Adult, SI | MN401346 | MN505208 | MN514043 | ||||
| 0368 | Masuria, Je, 2018 | Adult, SI | nd | MN505209 | MN514044 | ||||
| Felids | 0IS1 | Podkarpackie, L, 2013 | Adult, SI | nd | MN505210 | nd | |||
Abbreviations: U, Urwitałt; T, Tałty; W, Warsaw; J, Jagodne; K, Kłóbka; Wo, Wolbórz, My, Myślenice, Je, Jedwabno, B, Białowieża, L, Lubaczów; PC, peritoneal cavity; Liv, liver; SI, small intestine; nd, not done
Characteristics of the nucleotide datasets used in phylogenetic analyses
| Number of sequences | 51 | 33 | 63 |
| Sequence length variation (bp) | 222–337 | 593–1133 | 366–388 |
| Number of aligned positions | |||
| Total | 350 | 1206 | 388 |
| Constant | 193 | 1010 | 235 |
| Autapomorphic | 28 | 86 | 9 |
| Parsimony informative | 129 | 110 | 144 |
| Containing gaps | 171 | 707 | 29 |
| Percentage of gaps/missing data | 10.35 | 11.42 | 0.93 |
Fig. 1Maximum likelihood tree for Mesocestoides and relatives based on 18S rDNA (GTR + G model). Numbers along branches are bootstrap support (BS) and posterior probability (PP) values if corresponding bipartition was found in Bayesian 50% majority rule consensus tree. Only values of BS higher than 75% and PP higher than 0.95 are shown. The scale-bar indicates the expected number of nucleotide substitutions per site
Fig. 2Maximum likelihood tree for Mesocestoides and relatives based on mt 12S rDNA (GTR + G model). Numbers along branches are bootstrap support (BS) and posterior probability (PP) values if corresponding bipartition was found in Bayesian 50% majority rule consensus tree. Only values of BS higher than 75% and PP higher than 0.95 are shown. The scale-bar indicates the expected number of nucleotide substitutions per site
Fig. 3Maximum likelihood tree for Mesocestoides and relatives based on cox1 gene fragment (GTR + G model). Numbers along branches are bootstrap support (BS) and posterior probability (PP) values if corresponding bipartition was found in Bayesian 50% majority rule consensus tree. Only values of BS higher than 75% and PP higher than 0.95 are shown. The scale-bar indicates the expected number of nucleotide substitutions per site