Literature DB >> 32083482

Covalent Catalysis by Cross β Amyloid Nanotubes.

Baishakhi Sarkhel1, Ayan Chatterjee1, Dibyendu Das1.   

Abstract

The binding pockets of extant enzymes feature precise positioning of amino acid residues that facilitate multiple complex transformations exploiting covalent and non-covalent interactions. Reversible covalent anchoring is extensively used as an efficient tool by Nature for activating modern enzymes such as esterases and dehydratases and also for proteins like opsins for the complex process of visual phototransduction. Here we construct paracrystalline amyloid surfaces through the self-propagation of short peptides which offer binding pockets exposed with arrays of imidazoles and lysines. As covalent catalysis is utilized by modern-day enzymes, these homogeneous amyloid nanotubes exploit Schiff imine formation via the exposed lysines to efficiently hydrolyze both activated and inactivated esters. Controls where lysines were mutated with charged residues accessed similar morphologies but did not augment the rate. The designed amyloid microphases thus foreshadow the generation of binding pockets of advanced proteins and have the potential to contribute to the development of functional materials.

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Year:  2020        PMID: 32083482     DOI: 10.1021/jacs.9b13517

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  5 in total

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Authors:  Liam R Marshall; Ivan V Korendovych
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3.  Short peptide-based cross-β amyloids exploit dual residues for phosphoesterase like activity.

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Journal:  Chem Sci       Date:  2022-07-18       Impact factor: 9.969

4.  Stereoselective peptide catalysis in complex environments - from river water to cell lysates.

Authors:  Tobias Schnitzer; Jonas W Rackl; Helma Wennemers
Journal:  Chem Sci       Date:  2022-06-14       Impact factor: 9.969

5.  Self-Regulating Colloidal Co-Assemblies That Accelerate Their Own Destruction via Chemo-Structural Feedback.

Authors:  Charu Sharma; Andreas Walther
Journal:  Angew Chem Int Ed Engl       Date:  2022-03-14       Impact factor: 16.823

  5 in total

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