| Literature DB >> 32080163 |
Abstract
BACKGROUND The aim of this case-control study was to evaluate the correlation of caspase recruitment domain-containing protein 8 (CARD8) gene rs2043211 (exon) and rs7253718 (intron) polymorphisms with the susceptibility of ankylosing spondylitis (AS) in the Chinese Han population. MATERIAL AND METHODS CARD8 polymorphisms were genotyped by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) in 118 AS patients and 122 healthy persons. Linkage disequilibrium (LD) and haplotype analysis were carried out using Haploview software. Distribution differences of genotypes, alleles and haplotypes between the case and control groups were tested by chi-square test. Relative risk of AS was expressed by odds ratios (ORs) and 95% confidence intervals (CIs). Logistic regression analysis was used to adjust the results of association by clinical parameters. RESULTS For rs2043211, distribution of variant allele T was obviously different between AS patients and healthy controls (P=0.046). It indicated that T allele might increase the susceptibility of AS (OR=1.441, 95%CI=1.006-2.065). Adjusted by clinical characteristics, the significance of difference was slightly decreased (P=0.050, OR=1.439, 95%CI=0.999-2.072). Strong LD existed between rs2043211 and rs7253718 polymorphisms, and rs2043211T-rs7253718G haplotype was significantly associated with increased AS susceptibility (OR=1.787, 95%CI=1.165-2.740). In subgroup analysis, we found that the TT genotype and T allele of rs2043211 significantly increased the risk of AS in males (TT versus AA: OR=2.554, 95%CI=1.079-6.049; T versus A: OR=1.661, 95%CI=1.067-2.586), but not females. CONCLUSIONS CARD8 polymorphisms are likely to be associated with the elevated susceptibility of AS. Present results should be confirmed in the future studies.Entities:
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Year: 2020 PMID: 32080163 PMCID: PMC7055193 DOI: 10.12659/MSM.916935
Source DB: PubMed Journal: Med Sci Monit ISSN: 1234-1010
Primer sequences of CARD8 gene rs2043211 and rs7253718 polymorphisms.
| SNP | Primer sequence | Primer length (bp) | |
|---|---|---|---|
| rs2043211 | For. | 5′-ACCCTGTGTTTCTGAGACCCTTTG-3′ | 108 bp |
| Rev. | 5′-GATAGTTGACACTCAGGAACAGCACG-3′ | ||
| rs7253718 | For. | 5′-CCCTTCACTGTCTTGCTC-3′ | 218 bp |
| Rev. | 5′-CTGTATTGGGTCATTCTTG-3′ | ||
Figure 1Linkage disequilibrium (LD) status of CARD8 rs2043211 and rs7253718 polymorphisms, D’=1.0, r2=0.258.
Basic characteristics of participants.
| Basic features | Cases n=118(%) | Controls n=122(%) | χ2/t | |
|---|---|---|---|---|
| Age (year) | 36.15±13.09 | 38.40±15.13 | 0.220 | −1.523 |
| Gender (male/female) | 82/36 | 78/44 | 0.361 | 0.834 |
| Body mass index (kg/m2) | 23.30±2.45 | 23.31±2.46 | 0.978 | −0.042 |
| Smoking (%) | 34 (28.81) | 26 (21.31) | 0.180 | 1.801 |
| Drinking (%) | 26 (22.03) | 22 (18.03) | 0.439 | 0.600 |
| Family history (%) | 17 (3.39) | 5 (0.82) | 0.006 | 7.655 |
| Exercise habit (%) | 34 (28.81) | 43 (35.25) | 0.286 | 1.139 |
| HLA-B27 (positive/%) | 98 (83.05) | 17 (13.93) | <0.001 | 114.817 |
| Duration (year) | 5.36±2.31 |
Frequency comparisons of genotypes and alleles in CARD8 gene polymorphisms.
| Genotype/allele | Cases n=118 (%) | Controls n=122 (%) | χ2 | OR (95% CI) | OR | |||
|---|---|---|---|---|---|---|---|---|
| rs2043211 | 0.467 | |||||||
| AA | 25 (21.19) | 41 (33.61) | – | – | 1.00 | |||
| TA | 62 (52.54) | 56 (45.90) | 3.651 | 0.056 | 1.816 (0.982–3.358) | 0.085 | 1.727 (0.927–3.220) | |
| TT | 31 (26.27) | 25 (20.49) | 3.727 | 0.054 | 2.034 (0.985–4.197) | 0.057 | 2.041 (0.978–4.261) | |
| A | 112 (47.46) | 138 (56.56) | – | – | 1.00 | |||
| T | 124 (52.54) | 106 (43.44) | 3.980 | 0.046 | 1.441 (1.006–2.065) | 0.050 | 1.439 (0.999–2.072) | |
| rs7253718 | 0.990 | |||||||
| GG | 67 (56.78) | 74 (60.65) | – | – | 1.00 | |||
| AG | 45 (38.14) | 42 (34.43) | 0.381 | 0.537 | 1.183 (0.693–2.020) | 0.626 | 1.144 (0.666–1.966) | |
| AA | 6 (5.08) | 6 (4.92) | 0.027 | 0.869 | 1.104 (0.340–3.590) | 0.692 | 1.279 (0.378–4.328) | |
| G | 179 (75.85) | 190 (77.87) | – | – | 1.00 | |||
| A | 57 (24.15) | 54 (22.13) | 0.276 | 0.600 | 1.120 (0.733–1.713) | 0.565 | 1.135 (0.738–1.744) |
HWE – Hardy-Weinberg equilibrium;
P and OR values were adjusted by clinical parameters of participants.
OR – odds ratio; CI – confidence interval.
Analyses of LD and haplotypes in CARD8 rs2043211 and rs7253718 polymorphisms.
| Haplotypes | Cases 2n=236 (%) | Controls 2n=244 (%) | χ2 | OR (95%CI) | |
|---|---|---|---|---|---|
| rs2043211A-rs7253718G | 55 (23.31) | 84 (34.43) | – | – | 1.00 |
| rs2043211A-rs7253718A | 57 (24.15) | 54 (22.13) | 3.465 | 0.063 | 1.612 (0.974–2.669) |
| rs2043211T-rs7253718G | 124 (52.54) | 106 (43.44) | 7.137 | 0.008 | 1.787 (1.165–2.740) |
The genotype and allele of CARD8 polymorphisms.
| Genotype/allele | Age (year) | χ2 | OR (95% CI) | |||
|---|---|---|---|---|---|---|
| ≤40 | >40 | |||||
| rs2043211 | AA | 18 (22.22) | 7 (18.92) | – | – | 1.00 |
| TA | 41 (50.62) | 21 (56.76) | 0.281 | 0.596 | 0.759 (0.274–2.104) | |
| TT | 22 (27.16) | 9 (24.32) | 0.007 | 0.932 | 0.951 (0.296–3.056) | |
| A | 77 (47.53) | 35 (47.30) | 1.00 | |||
| T | 85 (52.47) | 39 (52.70) | 0.001 | 0.973 | 0.991 (0.571–1.718) | |
| rs7253718 | GG | 48 (59.26) | 19 (51.35) | 1.00 | ||
| AG | 29 (35.80) | 16 (43.24) | 0.649 | 0.420 | 0.717 (0.319–1.611) | |
| AA | 4 (4.94) | 2 (5.41) | 0.067 | 0.796 | 0.792 (0.134–4.688) | |
| G | 125 (77.16) | 54 (72.97) | 1.00 | |||
| A | 37 (22.84) | 20 (27.03) | 0.486 | 0.486 | 0.799 (0.425–1.502) | |
The subgroup analysis of the association between CARD8 polymorphisms and AS risk based on gender.
| Genotype/allele | Male | Female | ||||||
|---|---|---|---|---|---|---|---|---|
| Cases (n=82) | Controls (n=78) | OR (95% CI) | Cases (n=36) | Controls (n=44) | OR (95% CI) | |||
| rs2043211 | ||||||||
| AA | 19 (23.17) | 28 (35.90) | 6 (16.67) | 13 (29.54) | ||||
| TA | 37 (45.12) | 35 (44.87) | 0.241 | 1.558 (0.741–3.277) | 25 (69.44) | 21 (47.73) | 0.095 | 2.579 (0.835–7.969) |
| TT | 26 (31.71) | 15 (19.23) | 0.031 | 2.554 (1.079–6.049) | 5 (13.89) | 10 (22.73) | 0.914 | 1.083 (0.255–4.596) |
| A | 75 (45.73) | 91 (58.33) | 37 (51.39) | 47 (53.41) | ||||
| T | 89 (54.27) | 65 (41.67) | 0.024 | 1.661 (1.067–2.586) | 35 (48.61) | 41 (46.59) | 0.799 | 1.084 (0.581–2.023) |
| rs7253718 | ||||||||
| GG | 49 (59.76) | 51 (65.38) | 18 (50.00) | 23 (52.27) | ||||
| AG | 28 (34.15) | 23 (29.49) | 0.493 | 1.267 (0.644–2.493) | 17 (47.22) | 19 (43.18) | 0.770 | 1.143 (0.465–2.810) |
| AA | 5 (6.09) | 4 (5.13) | 0.706 | 1.301 (0.330–5.130) | 1 (2.78) | 2 (4.55) | 0.721 | 0.639 (0.054–7.617) |
| G | 126 (76.83) | 125 (80.13) | 53 (73.61) | 65 (73.86) | ||||
| A | 38 (23.17) | 31 (19.87) | 0.473 | 1.216 (0.712–2.076) | 19 (26.39) | 23 (26.14) | 0.971 | 1.013 (0.499–2.056) |