| Literature DB >> 32071406 |
Mai Thanh Binh1,2,3, Nghiem Xuan Hoan1,2,3, Dao Phuong Giang2,3, Hoang Van Tong1,2,4, C-Thomas Bock1,5, Heiner Wedemeyer6, Nguyen Linh Toan2,4, Mai Hong Bang3, Peter G Kremsner1, Christian G Meyer1,2,7, Le Huu Song2,3, Thirumalaisamy P Velavan8,9,10.
Abstract
SMYD3 (SET and MYND domain-containing protein 3) is involved in histone modification, which initiates oncogenesis by activating transcription of multiple downstream genes. To investigate associations of variable numbers of tandem repeats (VNTR) variants in the SMYD3 gene promoter, SMYD3 serum levels and SMYD3 mRNA expression in hepatitis B virus (HBV) infection and clinical progression of related liver disease. SMYD3 VNTRs were genotyped in 756 HBV patients and 297 healthy controls. SMYD3 serum levels were measured in 293 patients and SMYD3 mRNA expression was quantified in 48 pairs of hepatocellular tumor and adjacent non-tumor liver tissues. Genotype SYMD3 VNTR 3/3 was more frequent among HCC patients than in controls (Padjusted = 0.037). SMYD3 serum levels increased according to clinical progression of liver diseases (P = 0.01); HCC patients had higher levels than non-HCC patients (P = 0.04). Among patients with SMYD3 VNTR 3/3, HCC patients had higher SMYD3 levels than others (P < 0.05). SMYD3 mRNA expression was up-regulated in HCC tumor tissues compared to other tissues (P = 0.008). In conclusion, upregulation of SMYD3 correlates with the occurrence of HCC and SMYD3 VNTR 3/3 appears to increase the risk of HCC through increasing SMYD3 levels. SMYD3 may be an indicator for HCC development in HBV patients.Entities:
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Year: 2020 PMID: 32071406 PMCID: PMC7029004 DOI: 10.1038/s41598-020-59667-z
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Demographic and clinical characteristics of healthy controls and HBV patients.
| Characteristics | HC (n = 297) | HBV patients (n = 756) | CHB (n = 246) | LC (n = 174) | HCC (n = 336) | |
|---|---|---|---|---|---|---|
| Age (years) | 43 [16–69] | 52 [12–91] | 41 [12–85] | 56 [20–86] | 57 [15–91] | <0.0001# |
| Male (%) | 66.7 | 83.3 | 75.2 | 82.8 | 93.7 | <0.0001β |
| Child-Pugh | NA | |||||
| Child A | NA | 53/169 | 249/335 | |||
| Child B | NA | 75/169 | 65/300 | |||
| Child C | NA | 41/169 | 21/335 | |||
| Missing | NA | 5 | 1 | |||
| AST (IU/L) | NR | 132 [14–6206] | 187 [14–6206] | 119 [15–1221] | 101 [17–983] | <0.0001# |
| ALT (IU/L) | NR | 132 [8–3390] | 222 [9–3390] | 82 [8–1426] | 72 [11–1095] | 0.04# |
| Total bilirubin (µmol/L) | NR | 39.1 [4.1–571] | 34 [5.5–551] | 65.2 [4.1–571] | 29.4 [4.3–392] | <0.0001# |
| Direct bilirubin (µmol/L) | NR | 17.2 [0.4–349] | 16.1 [0.7–349] | 29.5 [0.4–291] | 11.6 [0.4–247.3] | <0.0001# |
| Albumin (g/L) | NR | 37 [15–48] | 42 [25–48] | 31.8 [15–47] | 37 [15–48] | <0.0001# |
| Prothrombin (% of standard) | NR | 82 [13–269] | 94 [17–267] | 60 [13–101] | 84 [20–269] | <0.0001# |
| <0.0001# | ||||||
| WBC (×103/mL) | NR | <0.0001# | ||||
| RBC(×106/mL) | NR | <0.0001# | ||||
| PLT (×103/ml) | NR | 174 [17–441] | 218 [66–379] | 106 [17–441] | 177 [34–432] | <0.0001# |
| HBV DNA (log10 copies/ml) | NR | 5.1 [1–10] | 5.2 [2–10] | 5 [1–10] | 5.1 [1–9] | 0.4# |
| AFP (IU/L) | NR | 142 [1–4029] | 7.4 [1–250] | 40 [1.18–707] | 280 [1–4029] | <0.0001# |
CHB, chronic hepatitis B; LC, liver cirrhosis; HCC, hepatocellular carcinoma; HC, healthy control; RBC, red blood cells; WBC, white blood cells; PLT, platelets. AST and ALT, aspartate and alanine aminotransferase; AFP, alpha-fetoprotein; NR, normal range, NA, not applicable. Values given are medians and ranges. (#) Kruskal-Wallis test (β): chi-square test.
Association of the variable number of tandem repeats of SMYD3 with HBV-related liver diseases.
| HC n = 297 (%) | CHB n = 246 (%) | LC n = 174 (%) | HCC n = 336 (%) | CHB + LC n = 420 (%) | HBV total n = 756 (%) | CHB vs HC | LC vs HC | HCC vs HC | HBV vs HC | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR(95%CI) | OR(95%CI) | OR(95%CI) | OR(95%CI) | |||||||||||
| 21 (7.1) | 14 (5.7) | 6 (3.4) | 7 (2.1) | 20 (4.8) | 27 (3.6) | Reference | Reference | Reference | Reference | |||||
| 64 (21.5) | 37 (15) | 29 (16.7) | 61 (18.2) | 66 (15.7) | 127 (16.8) | 0.75 (0.32–1.76) | 0.5 | 1.8 (0.59–5.6) | 0.3 | 2.7 (0.89–7.92) | 0.079 | 1.2 (0.58–2.44) | 0.6 | |
| 212 (71.4) | 195 (79.3) | 139 (79.9) | 268 (79.8) | 334 (79.5) | 602 (79.6) | 1.2 (0.6–2.6) | 0.5 | 2.2 (0.81–6.12) | 0.1 | 1.7 (0.88–3.15) | 0.1 | |||
| 106 (21.7) | 65 (13.2) | 41 (11.8) | 75 (11.2) | 106 (12.6) | 181 (12) | Reference | Reference | Reference | Reference | |||||
| 488 (78.3) | 427 (86.8) | 307 (88.2) | 597 (88.8) | 734 (87.4) | 1331 (88) | 1.4 (0.97–1.92) | 0.078 | 1.5 (1–2.38) | 0.05 | 1.4 (1.07–1.86) | ||||
| 85 (28.6) | 51 (20.7) | 35 (20.1) | 68 (20.2) | 86 (20.5) | 154 (20.4) | Reference | Reference | Reference | Reference | |||||
| 212 (71.4) | 195 (79.3 | 139 (79.9) | 268 979.8) | 334 (79.5) | 602 (79.6) | 1.5 (0.99–2.23) | 0.057 | 1.4 (0.88–2.4) | 0.1 | 1.3 (0.86–2.05) | 0.2 | 1.4 (1.02–1.97) | ||
| 21 (7.1) | 14 (5.7) | 6 (3.4) | 7 (2.1) | 20 (4.8) | 27 (3.6) | Reference | Reference | Reference | Reference | |||||
| 276 (92.9) | 232 (94.3) | 168 (96.6) | 329 (97.9) | 400 (95.2) | 729 (96.4 | 1.1 (0.55–2.35) | 0.7 | 2.2 (0.8–6.02) | 0.1 | 2.9 (1.07–8.03) | 1.6 (0.82–2.94) | 0.2 | ||
CHB, chronic hepatitis B; LC, liver cirrhosis; HCC, hepatocellular carcinoma; HC, healthy controls; n, numbers individuals; OR, Odd ratio. P values were calculated using binary logistic regression model adjusted for age and gender. Bold values reflect statistical significance.
Figure 1Association of the SMYD3 serum levels with HBV related liver diseases. The comparison of SMYD3 levels (A) among healthy controls and groups of patients according to HBV-related diseases, CHB, chronic hepatitis B; LC, liver cirrhosis without HCC; HCC, hepatocellular carcinoma; (B) between CHB patients with advanced stages patients (including LC and HCC), (C) between patients with and without cirrhosis, (D) between patients with and without HCC. Box-plots illustrate medians with 25 and 75 percentiles with whiskers to 10 and 90 percentiles; P value were calculated by using Kruskal-Wallis test or Mann-Whitney-Wilcoxon test.
Figure 2Association of the VNTRs of SMYD3 with SMYD3 serum levels in HBV-related liver diseases. Comparison of the SMYD3 serum levels among healthy controls and patients with HBV-related liver diseases who carry different SMYD3 VNTR genotypes. CHB, chronic hepatitis B, LC, liver cirrhosis without HCC, HCC, hepatocellular carcinoma. (A) Among healthy controls and HBV patients, (B) among healthy controls and patient subgroups including CHB, LC and HCC patients, Box-plots illustrate medians with 25 and 75 percentiles with whiskers to 10 and 90 percentiles; P values were calculated by using Mann-Whitney-Wilcoxon test or Kruskal-Wallis test.
Figure 3SMYD3 mRNA expression in liver specimens from 48 HCC patients. Relative quantitative real-time PCR analysis of SMYD3 mRNA levels. (A) Relative SMYD3 mRNA expression in tumor tissues and in adjacent non-tumor tissues. (B) The fold changed SMYD3 mRNA levels between the group of stage A-HCC patients and the group of stage B-HCC patients, (C) SMYD3 mRNA expression in stage-A and stage-B tumor tissues and in adjacent non-tumor tissues. P values were calculated by using Mann-Whitney-Wilcoxon test. Data are shown as mean values with 95% confidence intervals.