Literature DB >> 32067436

First Korean Case of Partial D DBS-1.

Sooin Choi1, HongBi Yu2, Duck Cho2,3.   

Abstract

Entities:  

Mesh:

Substances:

Year:  2020        PMID: 32067436      PMCID: PMC7054695          DOI: 10.3343/alm.2020.40.4.337

Source DB:  PubMed          Journal:  Ann Lab Med        ISSN: 2234-3806            Impact factor:   3.464


× No keyword cloud information.
Dear Editor, RHD and RHCE, encoding Rhesus proteins, are highly homologous genes located adjacently on the same chromosome (chromosome 1). Therefore, hybrid RHD genes, in which some portions are substituted with the RHCE sequence can change the extracellular loop of the RhD antigen, leading to variable reactivity to anti-D reagents [1]. Partial D phenotypes have historically been classified using epitope studies [2] and, recently, using genetic studies. DBS is a partial D phenotype characterized by c.[676G>C]+[697G>C] (NM_016124.4) and has been named based on its positive reactivity with the D monoclonal antibodies (MoAbs) BS228 and BS233 (Biotest, Dreieich, Germany) [3]. Three DBS subtypes have been reported till date: DBS-0 [1], DBS-1 [34], and DBS-2 [5]. Molecular studies have identified DBS-1 in an Arabian [3] and a Japanese family [4]; however, it is unknown whether DBS-1 correlates with the same hybrid gene of a single evolutionary origin in other, unrelated individuals from different ethnic groups. To the best of our knowledge, this is the first report of a DBS-1 case in a Korean family. This study was approved by the Institutional Review Board of Samsung Medical Center, Seoul, Korea (SMC-2019-11-160), and written informed consent was obtained from the proband and all family members. The proband was a Korean woman with fibrocystic breast changes, who was admitted to the Samsung Medical Center. D typing using anti-D Bioclone (MAD2 clone; Ortho Clinical Diagnostics, Raritan, NJ, USA) was negative. Weak D testing using anti-D Bioclone and human IgG/IgM monoclonal anti-D (Millipore, Livingston, UK) yielded a result of grade 2+, while the result of partial D testing using D-screen (Diagast, Loos, France) was consistent with DBS-1. The phenotypes of the current case and previously reported DBS cases are summarized in Table 1.
Table 1

Comparison of serologic characteristics based on analysis using MoAbs between previous DBS cases and the present DBS case. Partial D testing was performed using D-screen (Diagast, Loos, France)

TypeRhD phenotypeRhCE phenotypeEthnicityReference
D epitopeepD2epD3epD5epD6/7epD6/7, epD9*epD6/7, NAepD8epD9
MoAbsP3X249P3X290P3X241P3X35HM10HM16P3X61TH28, MS26MAD2, PolyclonalP3X21211F1P3X21223B10
DBS-0NANANANANANANANANANANACDeNA[1]
DBS-1PosPosNegNegNegNegNegNeg (IS)Neg (IS)NegPoscDEKoreanCurrent study
Pos (AHG)Pos (AHG)
Pos (1+)Pos (3+)NegNegNegNegNegNANANegPos (2+)cDEArabian[3]
Pos (1+)NANegNegNANegNANANANegPos (1+)cDEJapanese[4]
DBS-2NegNegNegNegNegNegNegNANATracePos (1+)cDEChinese[5]

*The results using human IgG/IgM monoclonal anti-D (Millipore, Livingston, UK); †The results using anti-D Bioclone (MAD2 clone; Ortho Clinical Diagnostics, Raritan, NJ, USA).

Abbreviations: ep, epitope; MoAbs, monoclonal antibodies; IS, immediate spin; AHG, antihuman globulin; Pos, positive; Neg, negative; NA, not available.

The RhCE phenotype was ccEe (anti-C, -c, -E, and -e antibodies were obtained from Bioclone, Ortho Clinical Diagnostics, Buckinghamshire, UK), and RHD genotyping was carried out according to a previously described method [6]. Exon 5 was not amplified by the primer sets used in this study, but the region from exon 4 to exon 6 was amplified and the PCR product was sequenced using RHCE exon 5-specific primers; the Rhesus box was also PCR-amplified (Fig. 1A). The proband harbored a hybrid RHD-cE(5)-D (DBS/d) allele involving the following amino acid changes: F223V, A226P, E233Q, V238M, V245L, G263R, and K267M. RHD genotypes of other family members are shown in Fig. 1B. The breakpoints were confirmed between exon 4 and exon 6 by intron analysis [34]. The 5′ breakpoint region was the same as that reported by Omi, et al. [4], whereas the 3′ breakpoint region was novel (Fig. 1C).
Fig. 1

Results of the genetic analysis of the proband and her family members. (A) Long-range PCR with primers located in non-Rhesus box sequences. A 2,778-bp fragment was amplified by PCR, indicating the presence of a hybrid RHD gene (lanes I-1, II-1, and II-2). (B) Pedigree, Rh phenotypes, and RHD genotypes of the Korean DBS-1 family. The genotypes and phenotypes of the DBS-1 family were determined using combined data from sequencing analysis, hybrid Rhesus box PCR, and serological analysis. Black circles indicate the DBS-1 phenotype. The proband is indicated by a black arrow. Total RHD deletion is denoted as “d” in the genotype. (C) Part of the RHD nucleotide sequence in DBS reported by Wagner, et al. [3] and this case. In both cases, the 5′ breakpoint region was located between the RHD-specific c.642-249T and the first RHCE-specific nucleotide, c.667G (blue arrow). The 3′ breakpoint region, located between the last RHCE-specific nucleotide and the first RHD-specific nucleotide of intron 5, differed for each case; it was located between c.800 and c.801+101 in the case reported by Wagner, et al. [3] and between c.801+1463 and c.801+1505 in the current case (white arrow).

In various partial D phenotypes, such as DIIIa, DVa, DVI, DAR, DFR, DBT, and DBS, RHD exon 5 is substituted with a part of RHCE exon 5 [7]. Exon 5 is predicted to encode the fourth extracellular loop of the D polypeptide. In DBS, the coexistence of two amino acid changes (A226P and E233Q) caused by c.676G>C and c.697G>C point variants is required for the characteristic phenotype [4]. A226P is observed in the fourth loop of antigen E [4] and is thought to have a considerable effect on D antigen density [1]. E233Q is also observed in the fourth loop as part of Dw (RH23) [8]. DBS-1 and -2, which share F223V, A226P, and E233Q, exhibited different reactivity to the MoAbs P3X249, P3X290, and P3X21211F1 (DBS-1, +/+/− and DBS-2, −/−/trace). This difference might have been caused by the change in the extracellular amino acid, V238M, which is found in DBS-0 and DBS-1, but not in DBS-2. Other amino acid changes observed in DBS-1, including V245L, G263R, and K267M, are located in the intracellular or transmembrane regions; however, they might affect the RhD phenotype. The genetic basis of the RhD blood group differs across races and ethnicities. For example, the RhD-negative phenotype mainly results from RHD deletion in Caucasians, whereas RHD alterations, such as RHD(4-7)-D, are common in Africans [9]. Asians exhibit a high prevalence of c.1227G>A (NM_016124.4), known as “Asia type DEL.” These ethnicity-specific trends are used not only to diagnose RhD variants, but also for transfusion protocols [10]. The 3′ breakpoint observed in our case differed from that found in a Japanese family [4], suggesting that the DBS-1 cases have different genetic origins. In conclusion, we reported the first case of DBS-1 in a Korean family. To understand the RhD characteristics specific to Korean ethnicity, further evaluation of RhD variants is required.
  9 in total

1.  Detection of Rh23 in the partial D phenotype associated with the D(Va) category.

Authors:  T Omi; H Okuda; S Iwamoto; E Kajii; J Takahashi; M Tanaka; Y Tani; R H Fraser; T Seno
Journal:  Transfusion       Date:  2000-02       Impact factor: 3.157

2.  Isolation, characterization, and family study of DTI, a novel partial D phenotype affecting the fourth external loop of D polypeptides.

Authors:  Toshinori Omi; Junko Takahashi; Taiko Seno; Mitsunobu Tanaka; Fumiya Hirayama; Michie Matsuo; Naoki Ueda; Kenryo Obara; Hiroshi Okuda; Sadahiko Iwamoto; Yoshihiko Tani; Eiji Kajii
Journal:  Transfusion       Date:  2002-04       Impact factor: 3.157

3.  RH genotyping in a sickle cell disease patient contributing to hematopoietic stem cell transplantation donor selection and management.

Authors:  Ross M Fasano; Alessandro Monaco; Emily Riehm Meier; Philippe Pary; A Hallie Lee-Stroka; John Otridge; Harvey G Klein; Francesco M Marincola; Naynesh R Kamani; Naomi L C Luban; David Stroncek; Willy A Flegel
Journal:  Blood       Date:  2010-07-19       Impact factor: 22.113

4.  DCS-1, DCS-2, and DFV share amino acid substitutions at the extracellular RhD protein vestibule.

Authors:  Willy A Flegel; Inge von Zabern; Andrea Doescher; Franz F Wagner; Jindra Vytisková; Martin Písacka
Journal:  Transfusion       Date:  2007-09-27       Impact factor: 3.157

5.  Molecular biology of partial D phenotypes.

Authors:  N D Avent; K M Finning; W Liu; M L Scott
Journal:  Transfus Clin Biol       Date:  1996       Impact factor: 1.406

6.  A D(V)-like phenotype is obliterated by A226P in the partial D DBS.

Authors:  F F Wagner; M Ernst; H H Sonneborn; W A Flegel
Journal:  Transfusion       Date:  2001-08       Impact factor: 3.157

7.  Partial D phenotypes and genotypes in the Chinese population.

Authors:  Luyi Ye; Pan Wang; Huanhuan Gao; Jiamin Zhang; Chen Wang; Qin Li; Shasha Han; Zhonghui Guo; Ying Yang; Ziyan Zhu
Journal:  Transfusion       Date:  2011-07-25       Impact factor: 3.157

8.  Planned Transfusion of D-Positive Blood Components in an Asia Type DEL Patient: Proposed Modification of the Korean National Guidelines for Blood Transfusion.

Authors:  Sooin Choi; Sejong Chun; Ji Young Seo; Ji Hyuk Yang; Duck Cho
Journal:  Ann Lab Med       Date:  2019-01       Impact factor: 3.464

9.  Genomic characterization of the RH locus detects complex and novel structural variation in multi-ethnic cohorts.

Authors:  Marsha M Wheeler; Kerry W Lannert; Haley Huston; Shelley N Fletcher; Samantha Harris; Gayle Teramura; Helena J Maki; Chris Frazar; Jason G Underwood; Tristan Shaffer; Adolfo Correa; Meghan Delaney; Alex P Reiner; James G Wilson; Deborah A Nickerson; Jill M Johnsen
Journal:  Genet Med       Date:  2018-06-29       Impact factor: 8.822

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.