Literature DB >> 32062754

Strand displacement-triggered G-quadruplex/rolling circle amplification strategy for the ultra-sensitive electrochemical sensing of exosomal microRNAs.

Xiaoqi Tang1, Yang Wang1,2, Lin Zhou1, Wenqing Zhang1, Sha Yang1, Lianyu Yu1, Shuang Zhao1, Kai Chang3, Ming Chen4,5,6.   

Abstract

Emerging evidence suggests that exosomal microRNAs are potential biomarkers for the early diagnosis and prognostic assessment of tumor. Here, we design a strand displacement-initiated G-quadruplex/rolling circle amplification (RCA) strategy for highly specific and sensitive electrochemical sensing of exosomal microRNAs. In the presence of exosomal miRNA-21, a locked nucleic acid (LNA)-labeled toehold mediated strand displacement reaction (TMSDR) is initiated, releasing output P2 to trigger the subsequent RCA reaction by hybridizing with the C-rich circular template. Then the obtained G-rich RCA products can bind to the probe anchored on the surface of gold electrode and generate G-quadruplex conformations. Based on the TMSDR-triggered G-quadruplex/RCA strategy, the detection limit of this electrochemical biosensor is down to 2.75 fM. Moreover, our biosensor exhibits excellent repeatability, stability, and high consistency compared to RT-PCR for clinical detection. In conclusion, this assay is expected to provide a hopeful strategy for the early non-invasive diagnosis and prognostic estimation of cancer. Graphical abstract Schematic illustration of electrochemical sensing of exosomal microRNAs based on strand displacement-initiated G-quadruplex/rolling circle amplification (RCA) strategy.

Entities:  

Keywords:  Biosensor; Exosomal microRNAs; G-quadruplex; Locked nucleic acid; Rolling circle amplification; Strand displacement

Year:  2020        PMID: 32062754     DOI: 10.1007/s00604-020-4143-9

Source DB:  PubMed          Journal:  Mikrochim Acta        ISSN: 0026-3672            Impact factor:   5.833


  33 in total

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Authors:  Nancy B Y Tsui; Enders K O Ng; Y M Dennis Lo
Journal:  Clin Chem       Date:  2002-10       Impact factor: 8.327

2.  Proximity hybridization triggered hemin/G-quadruplex formation for construction a label-free and signal-on electrochemical DNA sensor.

Authors:  Fenglei Gao; Taotao Fan; Jing Wu; Sha Liu; Yan Du; Yao Yao; Fuyi Zhou; Yu Zhang; Xianjiu Liao; Deqin Geng
Journal:  Biosens Bioelectron       Date:  2017-04-19       Impact factor: 10.618

3.  Achieving Single-Nucleotide Specificity in Direct Quantitative Analysis of Multiple MicroRNAs (DQAMmiR).

Authors:  David W Wegman; Farhad Ghasemi; Alexander S Stasheuski; Anna Khorshidi; Burton B Yang; Stanley K Liu; George M Yousef; Sergey N Krylov
Journal:  Anal Chem       Date:  2016-01-26       Impact factor: 6.986

4.  Multiple-targeted graphene-based nanocarrier for intracellular imaging of mRNAs.

Authors:  Ying Wang; Zhaohui Li; Misha Liu; Jinjin Xu; Dehong Hu; Yuehe Lin; Jinghong Li
Journal:  Anal Chim Acta       Date:  2017-07-14       Impact factor: 6.558

Review 5.  Isothermal Amplification for MicroRNA Detection: From the Test Tube to the Cell.

Authors:  Ruijie Deng; Kaixiang Zhang; Jinghong Li
Journal:  Acc Chem Res       Date:  2017-03-29       Impact factor: 22.384

6.  Formation of parallel four-stranded complexes by guanine-rich motifs in DNA and its implications for meiosis.

Authors:  D Sen; W Gilbert
Journal:  Nature       Date:  1988-07-28       Impact factor: 49.962

Review 7.  Intercellular communication by exosome-derived microRNAs in cancer.

Authors:  Bethany N Hannafon; Wei-Qun Ding
Journal:  Int J Mol Sci       Date:  2013-07-09       Impact factor: 5.923

8.  On the biophysics and kinetics of toehold-mediated DNA strand displacement.

Authors:  Niranjan Srinivas; Thomas E Ouldridge; Petr Sulc; Joseph M Schaeffer; Bernard Yurke; Ard A Louis; Jonathan P K Doye; Erik Winfree
Journal:  Nucleic Acids Res       Date:  2013-09-09       Impact factor: 16.971

9.  Adipose-derived circulating miRNAs regulate gene expression in other tissues.

Authors:  Thomas Thomou; Marcelo A Mori; Jonathan M Dreyfuss; Masahiro Konishi; Masaji Sakaguchi; Christian Wolfrum; Tata Nageswara Rao; Jonathon N Winnay; Ruben Garcia-Martin; Steven K Grinspoon; Phillip Gorden; C Ronald Kahn
Journal:  Nature       Date:  2017-02-15       Impact factor: 49.962

10.  A sensitive non-radioactive northern blot method to detect small RNAs.

Authors:  Sang Woo Kim; Zhihua Li; Patrick S Moore; A Paula Monaghan; Yuan Chang; Mark Nichols; Bino John
Journal:  Nucleic Acids Res       Date:  2010-01-15       Impact factor: 16.971

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  3 in total

1.  Recent Advances in Signal Amplification to Improve Electrochemical Biosensing for Infectious Diseases.

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2.  Rolling Circle Amplification as a Universal Method for the Analysis of a Wide Range of Biological Targets.

Authors:  R R Garafutdinov; A R Sakhabutdinova; A R Gilvanov; A V Chemeris
Journal:  Russ J Bioorg Chem       Date:  2021-12-16       Impact factor: 0.796

Review 3.  Exosomes as Powerful Engines in Cancer: Isolation, Characterization and Detection Techniques.

Authors:  Marwa Gamal Saad; Haluk Beyenal; Wen-Ji Dong
Journal:  Biosensors (Basel)       Date:  2021-12-16
  3 in total

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