Literature DB >> 32059429

In Vivo Rate of Formaldehyde Condensation with Tetrahydrofolate.

Hai He1, Elad Noor2, Perla A Ramos-Parra3,4, Liliana E García-Valencia3,4, Jenelle A Patterson5, Rocío I Díaz de la Garza3,4, Andrew D Hanson5, Arren Bar-Even1.   

Abstract

Formaldehyde is a highly reactive compound that participates in multiple spontaneous reactions, but these are mostly deleterious and damage cellular components. In contrast, the spontaneous condensation of formaldehyde with tetrahydrofolate (THF) has been proposed to contribute to the assimilation of this intermediate during growth on C1 carbon sources such as methanol. However, the in vivo rate of this condensation reaction is unknown and its possible contribution to growth remains elusive. Here, we used microbial platforms to assess the rate of this condensation in the cellular environment. We constructed Escherichia coli strains lacking the enzymes that naturally produce 5,10-methylene-THF. These strains were able to grow on minimal medium only when equipped with a sarcosine (N-methyl-glycine) oxidation pathway that sustained a high cellular concentration of formaldehyde, which spontaneously reacts with THF to produce 5,10-methylene-THF. We used flux balance analysis to derive the rate of the spontaneous condensation from the observed growth rate. According to this, we calculated that a microorganism obtaining its entire biomass via the spontaneous condensation of formaldehyde with THF would have a doubling time of more than three weeks. Hence, this spontaneous reaction is unlikely to serve as an effective route for formaldehyde assimilation.

Entities:  

Keywords:  auxotrophy; one-carbon metabolism; phenotypic phase plane; serine cycle; spontaneous reaction

Year:  2020        PMID: 32059429     DOI: 10.3390/metabo10020065

Source DB:  PubMed          Journal:  Metabolites        ISSN: 2218-1989


  4 in total

1.  Investigation of microbial community interactions between Lake Washington methanotrophs using -------genome-scale metabolic modeling.

Authors:  Mohammad Mazharul Islam; Tony Le; Shardhat R Daggumati; Rajib Saha
Journal:  PeerJ       Date:  2020-06-30       Impact factor: 2.984

2.  Special Issue "Metabolic Engineering and Synthetic Biology Volume 2".

Authors:  An N T Phan; Lars M Blank
Journal:  Metabolites       Date:  2021-01-06

Review 3.  Unravelling Formaldehyde Metabolism in Bacteria: Road towards Synthetic Methylotrophy.

Authors:  Vivien Jessica Klein; Marta Irla; Marina Gil López; Trygve Brautaset; Luciana Fernandes Brito
Journal:  Microorganisms       Date:  2022-01-20

Review 4.  Verrucomicrobial methanotrophs: ecophysiology of metabolically versatile acidophiles.

Authors:  Rob A Schmitz; Stijn H Peeters; Wouter Versantvoort; Nunzia Picone; Arjan Pol; Mike S M Jetten; Huub J M Op den Camp
Journal:  FEMS Microbiol Rev       Date:  2021-09-08       Impact factor: 16.408

  4 in total

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