Literature DB >> 32057243

Predictive Multivariate Models for Bioorthogonal Inverse-Electron Demand Diels-Alder Reactions.

Joao M J M Ravasco1, Jaime A S Coelho1.   

Abstract

Inverse-electron demand Diels-Alder cycloadditions have emerged as important bioorthogonal reactions in chemical biology. Understanding and predicting reaction rates for bioconjugation reactions is fundamental for evaluating their efficacy in biological systems. Here, we present multivariate models to predict the second order rate constants of bioorthogonal inverse-electron demand Diels-Alder reactions involving 1,2,4,5-tetrazines derivatives. A data-driven approach was used to model these reactions by parametrizing both the dienophiles and the dienes partners. The models are statistically robust and were used to predict/extrapolate the outcome of several reactions as well as to identify mechanistic differences among similar reactants.

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Year:  2020        PMID: 32057243     DOI: 10.1021/jacs.9b11948

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  6 in total

Review 1.  Recent Advances in the Development of Tetrazine Ligation Tools for Pretargeted Nuclear Imaging.

Authors:  Rocío García-Vázquez; Umberto Maria Battisti; Matthias M Herth
Journal:  Pharmaceuticals (Basel)       Date:  2022-05-30

2.  Amino acids with fluorescent tetrazine ethers as bioorthogonal handles for peptide modification.

Authors:  Enric Ros; Marina Bellido; Joan A Matarin; Albert Gallen; Manuel Martínez; Laura Rodríguez; Xavier Verdaguer; Lluís Ribas de Pouplana; Antoni Riera
Journal:  RSC Adv       Date:  2022-05-12       Impact factor: 4.036

3.  Nucleophilicity Prediction via Multivariate Linear Regression Analysis.

Authors:  Manuel Orlandi; Margarita Escudero-Casao; Giulia Licini
Journal:  J Org Chem       Date:  2021-02-03       Impact factor: 4.354

4.  How Oriented External Electric Fields Modulate Reactivity.

Authors:  Song Yu; Pascal Vermeeren; Trevor A Hamlin; F Matthias Bickelhaupt
Journal:  Chemistry       Date:  2021-01-21       Impact factor: 5.236

Review 5.  The 1,3-Dipolar Cycloaddition: From Conception to Quantum Chemical Design.

Authors:  Steven E Beutick; Pascal Vermeeren; Trevor A Hamlin
Journal:  Chem Asian J       Date:  2022-07-28

6.  Combining Machine Learning and Computational Chemistry for Predictive Insights Into Chemical Systems.

Authors:  John A Keith; Valentin Vassilev-Galindo; Bingqing Cheng; Stefan Chmiela; Michael Gastegger; Klaus-Robert Müller; Alexandre Tkatchenko
Journal:  Chem Rev       Date:  2021-07-07       Impact factor: 60.622

  6 in total

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