Literature DB >> 32055026

Innovative and rapid antimicrobial susceptibility testing systems.

Alex van Belkum1, Carey-Ann D Burnham2, John W A Rossen3,4, Frederic Mallard5, Olivier Rochas6, William Michael Dunne2,7.   

Abstract

Antimicrobial resistance (AMR) is a major threat to human health worldwide, and the rapid detection and quantification of resistance, combined with antimicrobial stewardship, are key interventions to combat the spread and emergence of AMR. Antimicrobial susceptibility testing (AST) systems are the collective set of diagnostic processes that facilitate the phenotypic and genotypic assessment of AMR and antibiotic susceptibility. Over the past 30 years, only a few high-throughput AST methods have been developed and widely implemented. By contrast, several studies have established proof of principle for various innovative AST methods, including both molecular-based and genome-based methods, which await clinical trials and regulatory review. In this Review, we discuss the current state of AST systems in the broadest technical, translational and implementation-related scope.

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Year:  2020        PMID: 32055026     DOI: 10.1038/s41579-020-0327-x

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  143 in total

Review 1.  Diagnostics as essential tools for containing antibacterial resistance.

Authors:  Iruka N Okeke; Rosanna W Peeling; Herman Goossens; Raymond Auckenthaler; Stuart S Olmsted; Jean-François de Lavison; Barbara L Zimmer; Mark D Perkins; Katarina Nordqvist
Journal:  Drug Resist Updat       Date:  2011-03-12       Impact factor: 18.500

2.  The high prevalence of antibiotic heteroresistance in pathogenic bacteria is mainly caused by gene amplification.

Authors:  Hervé Nicoloff; Karin Hjort; Bruce R Levin; Dan I Andersson
Journal:  Nat Microbiol       Date:  2019-02-11       Impact factor: 17.745

Review 3.  Prediction of antibiotic resistance: time for a new preclinical paradigm?

Authors:  Morten O A Sommer; Christian Munck; Rasmus Vendler Toft-Kehler; Dan I Andersson
Journal:  Nat Rev Microbiol       Date:  2017-07-31       Impact factor: 60.633

4.  Analysis of the clinical antibacterial and antituberculosis pipeline.

Authors:  Ursula Theuretzbacher; Simon Gottwalt; Peter Beyer; Mark Butler; Lloyd Czaplewski; Christian Lienhardt; Lorenzo Moja; Mical Paul; Sarah Paulin; John H Rex; Lynn L Silver; Melvin Spigelman; Guy E Thwaites; Jean-Pierre Paccaud; Stephan Harbarth
Journal:  Lancet Infect Dis       Date:  2018-10-15       Impact factor: 25.071

5.  Seven ways to preserve the miracle of antibiotics.

Authors:  John G Bartlett; David N Gilbert; Brad Spellberg
Journal:  Clin Infect Dis       Date:  2013-02-12       Impact factor: 9.079

Review 6.  Distinguishing between resistance, tolerance and persistence to antibiotic treatment.

Authors:  Asher Brauner; Ofer Fridman; Orit Gefen; Nathalie Q Balaban
Journal:  Nat Rev Microbiol       Date:  2016-04       Impact factor: 60.633

Review 7.  Lag Phase Is a Dynamic, Organized, Adaptive, and Evolvable Period That Prepares Bacteria for Cell Division.

Authors:  Robert L Bertrand
Journal:  J Bacteriol       Date:  2019-03-13       Impact factor: 3.490

8.  An Experimental Framework for Quantifying Bacterial Tolerance.

Authors:  Asher Brauner; Noam Shoresh; Ofer Fridman; Nathalie Q Balaban
Journal:  Biophys J       Date:  2017-06-20       Impact factor: 4.033

9.  De Novo Emergence of Peptides That Confer Antibiotic Resistance.

Authors:  Michael Knopp; Jonina S Gudmundsdottir; Tobias Nilsson; Finja König; Omar Warsi; Fredrika Rajer; Pia Ädelroth; Dan I Andersson
Journal:  mBio       Date:  2019-06-04       Impact factor: 7.867

10.  Value of hospital antimicrobial stewardship programs [ASPs]: a systematic review.

Authors:  Dilip Nathwani; Della Varghese; Jennifer Stephens; Wajeeha Ansari; Stephan Martin; Claudie Charbonneau
Journal:  Antimicrob Resist Infect Control       Date:  2019-02-12       Impact factor: 4.887

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  34 in total

1.  Interpreting k-mer-based signatures for antibiotic resistance prediction.

Authors:  Magali Jaillard; Mattia Palmieri; Alex van Belkum; Pierre Mahé
Journal:  Gigascience       Date:  2020-10-17       Impact factor: 6.524

2.  Gut Resistome after Antibiotics among Children with Uncomplicated Severe Acute Malnutrition: A Randomized Controlled Trial.

Authors:  Catherine E Oldenburg; Armin Hinterwirth; Millogo Ourohiré; Clarisse Dah; Moussa Ouédraogo; Ali Sié; Valentin Boudo; Cindi Chen; Kevin Ruder; Lina Zhong; Elodie Lebas; Fanice Nyatigo; Benjamin F Arnold; Kieran S O'Brien; Thuy Doan
Journal:  Am J Trop Med Hyg       Date:  2022-06-13       Impact factor: 3.707

3.  Enzyme-based sensing on nanohybrid film coated over FTO electrode for highly sensitive detection of antibiotics.

Authors:  Nidhi Chauhan; Sapna Balayan; Shaivya Gupta; Jaskaran Singh; Utkarsh Jain
Journal:  Bioprocess Biosyst Eng       Date:  2021-08-12       Impact factor: 3.210

4.  Rapid Antimicrobial Susceptibility Testing on Clinical Urine Samples by Video-Based Object Scattering Intensity Detection.

Authors:  Fenni Zhang; Jiapei Jiang; Michelle McBride; Xinyu Zhou; Yunze Yang; Manni Mo; Joseph Peterman; Thomas Grys; Shelley E Haydel; Nongjian Tao; Shaopeng Wang
Journal:  Anal Chem       Date:  2021-04-28       Impact factor: 6.986

5.  Gene-Gene Interactions Dictate Ciprofloxacin Resistance in Pseudomonas aeruginosa and Facilitate Prediction of Resistance Phenotype from Genome Sequence Data.

Authors:  Attika Rehman; Julie Jeukens; Roger C Levesque; Iain L Lamont
Journal:  Antimicrob Agents Chemother       Date:  2021-06-17       Impact factor: 5.191

6.  Microfluidic Systems for Antimicrobial Susceptibility Testing.

Authors:  Ann-Kathrin Klein; Andreas Dietzel
Journal:  Adv Biochem Eng Biotechnol       Date:  2022       Impact factor: 2.768

7.  Evaluation of FASTinov Ultrarapid Flow Cytometry Antimicrobial Susceptibility Testing Directly from Positive Blood Cultures.

Authors:  Ana Silva-Dias; Blanca Pérez-Viso; Inês Martins-Oliveira; Rosário Gomes; Acácio G Rodrigues; Rafael Cantón; Cidália Pina-Vaz
Journal:  J Clin Microbiol       Date:  2021-08-04       Impact factor: 5.948

Review 8.  Microfluidic systems for rapid antibiotic susceptibility tests (ASTs) at the single-cell level.

Authors:  Kaixiang Zhang; Shangshang Qin; Sixuan Wu; Yan Liang; Jinghong Li
Journal:  Chem Sci       Date:  2020-04-01       Impact factor: 9.825

9.  Exploring antimicrobial resistance to beta-lactams, aminoglycosides and fluoroquinolones in E. coli and K. pneumoniae using proteogenomics.

Authors:  Dimard E Foudraine; Nikolaos Strepis; Christoph Stingl; Marian T Ten Kate; Annelies Verbon; Corné H W Klaassen; Wil H F Goessens; Theo M Luider; Lennard J M Dekker
Journal:  Sci Rep       Date:  2021-06-14       Impact factor: 4.379

10.  Rapid Antibiotic Susceptibility Testing of Tier-1 Agents Bacillus anthracis, Yersinia pestis, and Francisella tularensis Directly From Whole Blood Samples.

Authors:  Shahar Rotem; Ohad Shifman; Moshe Aftalion; David Gur; Tamar Aminov; Ronit Aloni-Grinstein
Journal:  Front Microbiol       Date:  2021-07-09       Impact factor: 5.640

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