Literature DB >> 32050070

Design and Characterization of an Icosahedral Protein Cage Formed by a Double-Fusion Protein Containing Three Distinct Symmetry Elements.

Kevin A Cannon1,2, Vy N Nguyen1,2, Christian Morgan3, Todd O Yeates1,2,4,5.   

Abstract

Exploiting simple types of symmetry common to many natural protein oligomers as a starting point, several recent studies have succeeded in engineering complex self-assembling protein architectures reminiscent but distinct from those evolved in the natural world. Designing symmetric protein cages with a wide range of properties has been of particular interest for potential applications in the fields of medicine, energy, imaging, and more. In this study we genetically fused three naturally symmetric protein components together-a pentamer, trimer, and dimer-in a fashion designed to create a self-assembling icosahedral protein cage built from 60 copies of the protein subunit. The connection between the pentamer and dimer was based on a continuous shared α helix in order to control the relative orientation of those components. Following selection of suitable components by computational methods, a construct with favorable design properties was tested experimentally. Negative stain electron microscopy and solution-state methods indicated successful formation of a 60-subunit icosahedral cage, 2.5 MDa in mass and 30 nm in diameter. Diverse experimental studies also suggested substantial degrees of flexibility and asymmetric deformation of the assembled particle in solution. The results add further examples of successes and challenges in designing atomically precise protein materials.

Keywords:  encapsulation; protein cage; protein design; self-assembly; symmetry

Mesh:

Substances:

Year:  2020        PMID: 32050070     DOI: 10.1021/acssynbio.9b00392

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  11 in total

1.  A complete rule set for designing symmetry combination materials from protein molecules.

Authors:  Joshua Laniado; Todd O Yeates
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-25       Impact factor: 11.205

Review 2.  Protein Assembly by Design.

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Journal:  Chem Rev       Date:  2021-08-18       Impact factor: 72.087

Review 3.  Protein-based antigen presentation platforms for nanoparticle vaccines.

Authors:  Brian Nguyen; Niraj H Tolia
Journal:  NPJ Vaccines       Date:  2021-05-13       Impact factor: 7.344

4.  Generation of ordered protein assemblies using rigid three-body fusion.

Authors:  Ivan Vulovic; Qing Yao; Young-Jun Park; Alexis Courbet; Andrew Norris; Florian Busch; Aniruddha Sahasrabuddhe; Hannes Merten; Danny D Sahtoe; George Ueda; Jorge A Fallas; Sara J Weaver; Yang Hsia; Robert A Langan; Andreas Plückthun; Vicki H Wysocki; David Veesler; Grant J Jensen; David Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-08       Impact factor: 11.205

Review 5.  Artificial Organelles: Towards Adding or Restoring Intracellular Activity.

Authors:  Roy A J F Oerlemans; Suzanne B P E Timmermans; Jan C M van Hest
Journal:  Chembiochem       Date:  2021-03-04       Impact factor: 3.164

6.  Design of metal-mediated protein assemblies via hydroxamic acid functionalities.

Authors:  Rohit H Subramanian; Jie Zhu; Jake B Bailey; Jerika A Chiong; Yiying Li; Eyal Golub; F Akif Tezcan
Journal:  Nat Protoc       Date:  2021-05-28       Impact factor: 13.491

7.  A fragment-based protein interface design algorithm for symmetric assemblies.

Authors:  Joshua Laniado; Kyle Meador; Todd O Yeates
Journal:  Protein Eng Des Sel       Date:  2021-02-15       Impact factor: 1.952

8.  Self-assembly and regulation of protein cages from pre-organised coiled-coil modules.

Authors:  Fabio Lapenta; Jana Aupič; Marco Vezzoli; Žiga Strmšek; Stefano Da Vela; Dmitri I Svergun; José María Carazo; Roberto Melero; Roman Jerala
Journal:  Nat Commun       Date:  2021-02-11       Impact factor: 14.919

9.  Computational Design of Single-Peptide Nanocages with Nanoparticle Templating.

Authors:  José A Villegas; Nairiti J Sinha; Naozumi Teramoto; Christopher D Von Bargen; Darrin J Pochan; Jeffery G Saven
Journal:  Molecules       Date:  2022-02-12       Impact factor: 4.411

10.  Reversible molecular motional switch based on circular photoactive protein oligomers exhibits unexpected photo-induced contraction.

Authors:  Sang Jin Lee; Youngmin Kim; Tae Wu Kim; Cheolhee Yang; Kamatchi Thamilselvan; Hyeongseop Jeong; Jaekyung Hyun; Hyotcherl Ihee
Journal:  Cell Rep Phys Sci       Date:  2021-07-22
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