Literature DB >> 32045771

High-throughput sequencing reveals the diversity of TCR β chain CDR3 repertoire in patients with severe acne.

Lei Shao1, Yumei Liu1, Junpu Mei2, Dongmei Li3, Lijie Chen1, Qingli Pan1, Shujuan Zhang1, Xiangnong Dai1, Jingyao Liang4, Silong Sun5, Jianqin Wang6.   

Abstract

Acne is a common chronic inflammatory skin disease, and the inflammation immune response runs through all stages of acne lesions. In this study, we use a combination of multiplex-PCR and high-throughput sequencing technologies to analyze T cell receptor β chain CDR3 (complementarity-determining region 3) in peripheral blood isolated from severe acne patients. Once compared with healthy controls, we propose to identify acne-relevant CDR3 peptides. Our results reveal that the diversity of T cell receptor β chain (TRB) CDR3 sequences in the peripheral blood of the severe acne vulgaris (SA) group differed from that of the control group. In addition, we find 10 TRB CDR3 sequences, amino acid sequences and V-J combinations with significantly different expressions between the SA group and the non-acne (NA) group (P < 0.0001). These findings may contribute to a better understanding of the role of immunity in the pathogenesis of acne and may serve as biomarkers for evaluating risk or prognosis of severe acne disease in future.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Acne vulgaris; CDR3; High-throughput sequencing; Repertoire; TCR

Year:  2020        PMID: 32045771     DOI: 10.1016/j.molimm.2020.01.024

Source DB:  PubMed          Journal:  Mol Immunol        ISSN: 0161-5890            Impact factor:   4.407


  2 in total

1.  Characterization of the TCR β Chain Repertoire in Peripheral Blood from Hepatitis B Vaccine Responders and Non-Responders.

Authors:  Jiezuan Yang; Yongtao Li; Jing Ye; Ju Wang; Haifeng Lu; Xinsheng Yao
Journal:  J Inflamm Res       Date:  2022-02-14

2.  Second-Strand Synthesis-Based Massively Parallel scRNA-Seq Reveals Cellular States and Molecular Features of Human Inflammatory Skin Pathologies.

Authors:  Travis K Hughes; Marc H Wadsworth; Todd M Gierahn; Tran Do; David Weiss; Priscila R Andrade; Feiyang Ma; Bruno J de Andrade Silva; Shuai Shao; Lam C Tsoi; Jose Ordovas-Montanes; Johann E Gudjonsson; Robert L Modlin; J Christopher Love; Alex K Shalek
Journal:  Immunity       Date:  2020-10-13       Impact factor: 43.474

  2 in total

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