Literature DB >> 32043895

Circular RNA expression profiles and bioinformatic analysis in coronary heart disease.

Fangpu Yu1, Yuanyuan Tie1, Ya Zhang1, Zunzhe Wang1, Liwen Yu1, Lin Zhong2, Cheng Zhang1.   

Abstract

Aim: We aimed to identify the expression profile and role of circular RNAs (circRNAs) in coronary heart disease (CHD). Materials & methods: We performed sequence analysis of circRNAs in peripheral blood mononuclear cells of 70 CHD patients and 30 controls. Eight selected circRNAs were validated using quantitative real-time polymerase chain reaction (qRT-PCR) in human atherosclerotic coronary arteries.
Results: In total, 2283 downregulated and 85 upregulated circRNAs were identified in CHD. Parental genes of top 100 dysregulated-circRNAs are related to metabolism and protein modification, and 12 circRNAs might upregulate their CHD-related parental genes through miRNA sponges. Of the eight circRNAs validated in atherosclerotic coronary arteries by qRT-PCR, six were consistent with sequencing results of peripheral blood mononuclear cells.
Conclusion: As potential ceRNAs, dysregulated circRNAs may be involved in CHD pathophysiology.

Entities:  

Keywords:  RNA sequencing (RNA-seq); circular RNAs (circRNAs); coronary heart disease (CHD); miRNA

Mesh:

Substances:

Year:  2020        PMID: 32043895     DOI: 10.2217/epi-2019-0369

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  8 in total

Review 1.  Disease-Associated Circular RNAs: From Biology to Computational Identification.

Authors:  Min Tang; Ling Kui; Guanyi Lu; Wenqiang Chen
Journal:  Biomed Res Int       Date:  2020-08-17       Impact factor: 3.411

Review 2.  A Guide to the Short, Long and Circular RNAs in Hypertension and Cardiovascular Disease.

Authors:  Priscilla R Prestes; Michelle C Maier; Bradley A Woods; Fadi J Charchar
Journal:  Int J Mol Sci       Date:  2020-05-22       Impact factor: 5.923

Review 3.  Circular RNAs in Sudden Cardiac Death Related Diseases: Novel Biomarker for Clinical and Forensic Diagnosis.

Authors:  Meihui Tian; Zhipeng Cao; Hao Pang
Journal:  Molecules       Date:  2021-02-21       Impact factor: 4.411

4.  CircNEIL3 mediates pyroptosis to influence lung adenocarcinoma radiotherapy by upregulating PIF1 through miR-1184 inhibition.

Authors:  Ting Zhang; Dong-Ming Wu; Peng-Wei Luo; Teng Liu; Rong Han; Shi-Hua Deng; Miao He; Yang-Yang Zhao; Ying Xu
Journal:  Cell Death Dis       Date:  2022-02-21       Impact factor: 8.469

5.  Construction of a circRNA-miRNA-mRNA Regulatory Network for Coronary Artery Disease by Bioinformatics Analysis.

Authors:  Zebo Zhang; Haiyan Qian; Li Wang; Zhenbo Tao; Keai Cheng; Kaiyue Wang; Yanqing Xie; Lina Zhang
Journal:  Cardiol Res Pract       Date:  2022-02-16       Impact factor: 1.866

Review 6.  Emerging Roles of Extracellular Vesicle-Delivered Circular RNAs in Atherosclerosis.

Authors:  Cheng Wen; Bowei Li; Lei Nie; Ling Mao; Yuanpeng Xia
Journal:  Front Cell Dev Biol       Date:  2022-04-04

7.  Potential of immune-related genes as promising biomarkers for premature coronary heart disease through high throughput sequencing and integrated bioinformatics analysis.

Authors:  Haiming Wang; Junjie Shao; Xuechun Lu; Min Jiang; Xin Li; Zifan Liu; Yunzhang Zhao; Jingjing Zhou; Lejian Lin; Lin Wang; Qiang Xu; Yundai Chen; Ran Zhang
Journal:  Front Cardiovasc Med       Date:  2022-08-26

8.  Hsa_circ_0000437 upregulates and promotes disease progression in rheumatic valvular heart disease.

Authors:  Linwen Zhu; Zhifang Wang; Lebo Sun; Dawei Zheng; Bingchuan Hu; Ni Li; Guofeng Shao
Journal:  J Clin Lab Anal       Date:  2021-12-24       Impact factor: 2.352

  8 in total

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