Literature DB >> 32038006

Tabrizicola piscis sp. nov., isolated from the intestinal tract of a Korean indigenous freshwater fish, Acheilognathus koreensis.

Jeong Eun Han1, Woorim Kang1, June-Young Lee1, Hojun Sung1, Dong-Wook Hyun1, Hyun Sik Kim1, Pil Soo Kim1, Euon Jung Tak1, Yun-Seok Jeong1, Jae-Yun Lee1, So-Yeon Lee1, Ji-Hyun Yun1, Mi-Ja Jung1, Na-Ri Shin1, Tae Woong Whon1, Myung-Suk Kang2, Ki-Eun Lee3, Byoung-Hee Lee3, Jin-Woo Bae.   

Abstract

A novel Gram-negative, obligately aerobic, rod-shaped and non-motile bacterium, designated strain K13M18T, was isolated from the intestinal tract of a Korean indigenous fish, oily bitterling (Acheilognathus koreensis). Strain K13M18T formed creamy-pink colonies on a marine agar plate. Results of phylogenetic analysis based on the 16S rRNA gene sequence similarity indicated that strain K13M18T was most closely related to Tabrizicola sediminis DRYC-M-16T, sharing 97.62 % similarity with that strain. Strain K13M18T belonged to the genus Tabrizicola, which formed a cluster with Tabrizicola aquatica RCRI19T, Tabrizicola fusiformis SY72T, Tabrizicola sediminis DRYC-M-16T and Tabrizicola alkalilacus DJCT in a phylogenetic tree based on the 16S rRNA gene sequences. Strain K13M18T grown optimally in 0 % (w/v) NaCl, at pH 7 and 30 °C, in a marine broth medium. The predominant cellular fatty acids were C18 : 1 ω7c and C18 : 1 ω6c. The major respiratory isoprenoid quinone was ubiquinone Q-10. Polar lipids of strain K13M18T contained phosphatidylcholine, phosphatidylglycerol, phosphatidylinositol, diphosphatidylglycerol, six unidentified aminophospholipids, one unidentified aminolipid and an unidentified lipid. Based on genome sequencing, the DNA G+C content of strain K13M18T was 64.08 mol %, with an average nucleotide identity value, calculated by a comparative genomic analysis of strains K13M18T and T. sediminis DRYC-M-16T, of 74.82 %. Based on the phylogenetic, genotypic, and phenotypic information, strain K13M18T is proposed to be a novel species of the genus Tabrizicola. The type strain is K13M18T (=KCTC 62659T=JCM 33230T).

Entities:  

Keywords:  Acheilognathus koreensis; Korean indigenous freshwater fish; Tabrizicola piscis; gut microbiota

Year:  2020        PMID: 32038006     DOI: 10.1099/ijsem.0.004034

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  1 in total

1.  Neotabrizicola shimadae gen. nov., sp. nov., an aerobic anoxygenic phototrophic bacterium harbouring photosynthetic genes in the family Rhodobacteraceae, isolated from a terrestrial hot spring.

Authors:  So Muramatsu; Setsuko Hirose; Takao Iino; Moriya Ohkuma; Satoshi Hanada; Shin Haruta
Journal:  Antonie Van Leeuwenhoek       Date:  2022-04-05       Impact factor: 2.271

  1 in total

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