Literature DB >> 32037011

Mouse Systems Genetics as a Prelude to Precision Medicine.

Hao Li1, Johan Auwerx2.   

Abstract

Mouse models have been instrumental in understanding human disease biology and proposing possible new treatments. The precise control of the environment and genetic composition of mice allows more rigorous observations, but limits the generalizability and translatability of the results into human applications. In the era of precision medicine, strategies using mouse models have to be revisited to effectively emulate human populations. Systems genetics is one promising paradigm that may promote the transition to novel precision medicine strategies. Here, we review the state-of-the-art resources and discuss how mouse systems genetics helps to understand human diseases and to advance the development of precision medicine, with an emphasis on the existing resources and strategies.
Copyright © 2020 The Author(s). Published by Elsevier Ltd.. All rights reserved.

Entities:  

Keywords:  genetic reference population; mouse models; precision medicine; systems biology; systems genetics

Mesh:

Year:  2020        PMID: 32037011      PMCID: PMC7106150          DOI: 10.1016/j.tig.2020.01.004

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  114 in total

1.  Genetic structure of the LXS panel of recombinant inbred mouse strains: a powerful resource for complex trait analysis.

Authors:  Robert W Williams; Beth Bennett; Lu Lu; Jing Gu; John C DeFries; Phyllis J Carosone-Link; Brad A Rikke; John K Belknap; Thomas E Johnson
Journal:  Mamm Genome       Date:  2004-08       Impact factor: 2.957

2.  Integrative approaches for large-scale transcriptome-wide association studies.

Authors:  Alexander Gusev; Arthur Ko; Huwenbo Shi; Gaurav Bhatia; Wonil Chung; Brenda W J H Penninx; Rick Jansen; Eco J C de Geus; Dorret I Boomsma; Fred A Wright; Patrick F Sullivan; Elina Nikkola; Marcus Alvarez; Mete Civelek; Aldons J Lusis; Terho Lehtimäki; Emma Raitoharju; Mika Kähönen; Ilkka Seppälä; Olli T Raitakari; Johanna Kuusisto; Markku Laakso; Alkes L Price; Päivi Pajukanta; Bogdan Pasaniuc
Journal:  Nat Genet       Date:  2016-02-08       Impact factor: 38.330

Review 3.  Applications and Limitations of Mouse Models for Understanding Human Atherosclerosis.

Authors:  Moritz von Scheidt; Yuqi Zhao; Zeyneb Kurt; Calvin Pan; Lingyao Zeng; Xia Yang; Heribert Schunkert; Aldons J Lusis
Journal:  Cell Metab       Date:  2016-12-01       Impact factor: 27.287

4.  Genetic variation in the murine lifespan response to dietary restriction: from life extension to life shortening.

Authors:  Chen-Yu Liao; Brad A Rikke; Thomas E Johnson; Vivian Diaz; James F Nelson
Journal:  Aging Cell       Date:  2009-10-30       Impact factor: 9.304

Review 5.  Developing and evaluating polygenic risk prediction models for stratified disease prevention.

Authors:  Nilanjan Chatterjee; Jianxin Shi; Montserrat García-Closas
Journal:  Nat Rev Genet       Date:  2016-05-03       Impact factor: 53.242

6.  Comparison of Gene Expression Patterns Between Mouse Models of Nonalcoholic Fatty Liver Disease and Liver Tissues From Patients.

Authors:  Andreas Teufel; Timo Itzel; Wiebke Erhart; Mario Brosch; Xiao Yu Wang; Yong Ook Kim; Witigo von Schönfels; Alexander Herrmann; Stefan Brückner; Felix Stickel; Jean-François Dufour; Triantafyllos Chavakis; Claus Hellerbrand; Rainer Spang; Thorsten Maass; Thomas Becker; Stefan Schreiber; Clemens Schafmayer; Detlef Schuppan; Jochen Hampe
Journal:  Gastroenterology       Date:  2016-06-16       Impact factor: 22.682

7.  Defining the consequences of genetic variation on a proteome-wide scale.

Authors:  Joel M Chick; Steven C Munger; Petr Simecek; Edward L Huttlin; Kwangbom Choi; Daniel M Gatti; Narayanan Raghupathy; Karen L Svenson; Gary A Churchill; Steven P Gygi
Journal:  Nature       Date:  2016-06-15       Impact factor: 49.962

8.  Joint mouse-human phenome-wide association to test gene function and disease risk.

Authors:  Xusheng Wang; Ashutosh K Pandey; Megan K Mulligan; Evan G Williams; Khyobeni Mozhui; Zhengsheng Li; Virginija Jovaisaite; L Darryl Quarles; Zhousheng Xiao; Jinsong Huang; John A Capra; Zugen Chen; William L Taylor; Lisa Bastarache; Xinnan Niu; Katherine S Pollard; Daniel C Ciobanu; Alexander O Reznik; Artem V Tishkov; Igor B Zhulin; Junmin Peng; Stanley F Nelson; Joshua C Denny; Johan Auwerx; Lu Lu; Robert W Williams
Journal:  Nat Commun       Date:  2016-02-02       Impact factor: 14.919

9.  Genome-wide association of multiple complex traits in outbred mice by ultra-low-coverage sequencing.

Authors:  Jérôme Nicod; Robert W Davies; Na Cai; Carl Hassett; Leo Goodstadt; Cormac Cosgrove; Benjamin K Yee; Vikte Lionikaite; Rebecca E McIntyre; Carol Ann Remme; Elisabeth M Lodder; Jennifer S Gregory; Tertius Hough; Russell Joynson; Hayley Phelps; Barbara Nell; Clare Rowe; Joe Wood; Alison Walling; Nasrin Bopp; Amarjit Bhomra; Polinka Hernandez-Pliego; Jacques Callebert; Richard M Aspden; Nick P Talbot; Peter A Robbins; Mark Harrison; Martin Fray; Jean-Marie Launay; Yigal M Pinto; David A Blizard; Connie R Bezzina; David J Adams; Paul Franken; Tom Weaver; Sara Wells; Steve D M Brown; Paul K Potter; Paul Klenerman; Arimantas Lionikas; Richard Mott; Jonathan Flint
Journal:  Nat Genet       Date:  2016-07-04       Impact factor: 38.330

10.  Genetic Regulation of Plasma Lipid Species and Their Association with Metabolic Phenotypes.

Authors:  Pooja Jha; Molly T McDevitt; Emina Halilbasic; Evan G Williams; Pedro M Quiros; Karim Gariani; Maroun B Sleiman; Rahul Gupta; Arne Ulbrich; Adam Jochem; Joshua J Coon; Michael Trauner; David J Pagliarini; Johan Auwerx
Journal:  Cell Syst       Date:  2018-06-13       Impact factor: 10.304

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  14 in total

1.  Inhibiting serotonin signaling through HTR2B in visceral adipose tissue improves obesity-related insulin resistance.

Authors:  Won Gun Choi; Wonsuk Choi; Tae Jung Oh; Hye-Na Cha; Inseon Hwang; Yun Kyung Lee; Seung Yeon Lee; Hyemi Shin; Ajin Lim; Dongryeol Ryu; Jae Myoung Suh; So-Young Park; Sung Hee Choi; Hail Kim
Journal:  J Clin Invest       Date:  2021-12-01       Impact factor: 14.808

2.  A systems genetics approach delineates the role of Bcl2 in leukemia pathogenesis.

Authors:  Xinfeng Wang; Akhilesh Kumar Bajpai; Qingqing Gu; Arthur Centeno; Athena Starlard-Davenport; Pjotr Prins; Fuyi Xu; Lu Lu
Journal:  Leuk Res       Date:  2022-02-09       Impact factor: 3.715

3.  Integrative Analyses Reveal Tstd1 as a Potential Modulator of HDL Cholesterol and Mitochondrial Function in Mice.

Authors:  Adi Zheng; Hao Li; Zhihui Feng; Jiankang Liu
Journal:  Cells       Date:  2021-11-01       Impact factor: 6.600

Review 4.  Modeling Rare Human Disorders in Mice: The Finnish Disease Heritage.

Authors:  Tomáš Zárybnický; Anne Heikkinen; Salla M Kangas; Marika Karikoski; Guillermo Antonio Martínez-Nieto; Miia H Salo; Johanna Uusimaa; Reetta Vuolteenaho; Reetta Hinttala; Petra Sipilä; Satu Kuure
Journal:  Cells       Date:  2021-11-13       Impact factor: 6.600

5.  Genetic Diversity in Chimpanzee Transcriptomics Does Not Represent Wild Populations.

Authors:  Navya Shukla; Bobbie Shaban; Irene Gallego Romero
Journal:  Genome Biol Evol       Date:  2021-11-05       Impact factor: 3.416

6.  Dietary intervention improves health metrics and life expectancy of the genetically obese Titan mouse.

Authors:  Annika Müller-Eigner; Adrián Sanz-Moreno; Irene de-Diego; Anuroop Venkateswaran Venkatasubramani; Martina Langhammer; Raffaele Gerlini; Birgit Rathkolb; Antonio Aguilar-Pimentel; Tanja Klein-Rodewald; Julia Calzada-Wack; Lore Becker; Sergio Palma-Vera; Benedikt Gille; Ignasi Forne; Axel Imhof; Chen Meng; Christina Ludwig; Franziska Koch; John T Heiker; Angela Kuhla; Vanessa Caton; Julia Brenmoehl; Henry Reyer; Jennifer Schoen; Helmut Fuchs; Valerie Gailus-Durner; Andreas Hoeflich; Martin Hrabe de Angelis; Shahaf Peleg
Journal:  Commun Biol       Date:  2022-05-03

7.  Genetic variation of putative myokine signaling is dominated by biological sex and sex hormones.

Authors:  Leandro M Velez; Cassandra Van; Timothy Moore; Zhenqi Zhou; Casey Johnson; Andrea L Hevener; Marcus M Seldin
Journal:  Elife       Date:  2022-04-13       Impact factor: 8.713

8.  The Yin and the Yang of Transformative Research During the COVID-19 Pandemic-A Perspective.

Authors:  Venkatesh Sampath; Ramani Ramchandran
Journal:  Front Pediatr       Date:  2021-06-24       Impact factor: 3.418

Review 9.  Advances in mouse genetics for the study of human disease.

Authors:  Steve D M Brown
Journal:  Hum Mol Genet       Date:  2021-10-01       Impact factor: 6.150

Review 10.  Mouse Genetic Reference Populations: Cellular Platforms for Integrative Systems Genetics.

Authors:  Emily Swanzey; Callan O'Connor; Laura G Reinholdt
Journal:  Trends Genet       Date:  2020-09-30       Impact factor: 11.639

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