Literature DB >> 32034988

Lack of orientation selectivity of the heme insertion in murine neuroglobin revealed by resonance Raman spectroscopy.

Lisa Milazzo1, Cécile Exertier2,3, Maurizio Becucci1,4, Ida Freda2,3, Linda Celeste Montemiglio2,3,5, Carmelinda Savino5, Beatrice Vallone2,3,5, Giulietta Smulevich1.   

Abstract

Different murine neuroglobin variants showing structural and dynamic alterations that are associated with perturbation of ligand binding have been studied: the CD loop mutants characterized by an enhanced flexibility (Gly-loop40-48 and Gly-loop44-47 ), the F106A mutant, and the double Gly-loop44-47 /F106A mutant. Their ferric resonance Raman spectra in solution and in crystals are almost identical. In the high-frequency region, the identification of a double set of core size marker bands indicates the presence of two 6-coordinate low spin species. The resonance Raman data, together with the corresponding crystal structures, indicate the presence of two neuroglobin conformers with a reversed (A conformer) or a canonical (B conformer) heme insertion orientation. With the identification of the marker bands corresponding to each conformer, the data indicate that the B conformer increases at the expense of the A form, predominantly in the Gly-loop44-47 /F106A double mutant, as confirmed by X-ray crystallography. This is the first time that a reversed heme insertion has been identified by resonance Raman in a native 6-coordinate low-spin heme protein. This diagnostic tool could be extended to other heme proteins in order to detect heme orientational disorder, which are likely to be correlated to functionally relevant heme dynamics. DATABASE: Crystallographic structure: structural data are deposited in the Protein Data Bank under the 6RA6 PDB entry.
© 2020 Federation of European Biochemical Societies.

Entities:  

Keywords:  micro-Raman; reversed heme; selected mutants; single crystal; vinyl groups

Year:  2020        PMID: 32034988     DOI: 10.1111/febs.15241

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  3 in total

1.  A Plant Gene Encoding One-Heme and Two-Heme Hemoglobins With Extreme Reactivities Toward Diatomic Gases and Nitrite.

Authors:  Irene Villar; Estíbaliz Larrainzar; Lisa Milazzo; Carmen Pérez-Rontomé; Maria C Rubio; Giulietta Smulevich; Jesús I Martínez; Michael T Wilson; Brandon Reeder; Raul Huertas; Stefania Abbruzzetti; Michael Udvardi; Manuel Becana
Journal:  Front Plant Sci       Date:  2020-11-19       Impact factor: 5.753

2.  Initial Steps to Engineer Coproheme Decarboxylase to Obtain Stereospecific Monovinyl, Monopropionyl Deuterohemes.

Authors:  Hanna Michlits; Nina Valente; Georg Mlynek; Stefan Hofbauer
Journal:  Front Bioeng Biotechnol       Date:  2022-01-24

3.  Probing the Role of Murine Neuroglobin CDloop-D-Helix Unit in CO Ligand Binding and Structural Dynamics.

Authors:  Cécile Exertier; Federico Sebastiani; Ida Freda; Elena Gugole; Gabriele Cerutti; Giacomo Parisi; Linda Celeste Montemiglio; Maurizio Becucci; Cristiano Viappiani; Stefano Bruno; Carmelinda Savino; Carlotta Zamparelli; Massimiliano Anselmi; Stefania Abbruzzetti; Giulietta Smulevich; Beatrice Vallone
Journal:  ACS Chem Biol       Date:  2022-07-07       Impact factor: 4.634

  3 in total

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