| Literature DB >> 32033231 |
The-Hanh Pham1, Jahmunah Vicnesh1, Joel Koh En Wei1, Shu Lih Oh1, N Arunkumar2, Enas W Abdulhay3, Edward J Ciaccio4, U Rajendra Acharya1,5,6.
Abstract
Autistic individuals often have difficulties expressing or controlling emotions and have poor eye contact, among other symptoms. The prevalence of autism is increasing globally, posing a need to address this concern. Current diagnostic systems have particular limitations; hence, some individuals go undiagnosed or the diagnosis is delayed. In this study, an effective autism diagnostic system using electroencephalogram (EEG) signals, which are generated from electrical activity in the brain, was developed and characterized. The pre-processed signals were converted to two-dimensional images using the higher-order spectra (HOS) bispectrum. Nonlinear features were extracted thereafter, and then reduced using locality sensitivity discriminant analysis (LSDA). Significant features were selected from the condensed feature set using Student's t-test, and were then input to different classifiers. The probabilistic neural network (PNN) classifier achieved the highest accuracy of 98.70% with just five features. Ten-fold cross-validation was employed to evaluate the performance of the classifier. It was shown that the developed system can be useful as a decision support tool to assist healthcare professionals in diagnosing autism.Entities:
Keywords: 10-fold validation; EEG signals; autism spectrum disorder; classifiers; computer-aided brain diagnostic system; higher-order spectra bispectrum; locality sensitivity discriminant analysis; nonlinear features; t-test
Mesh:
Year: 2020 PMID: 32033231 PMCID: PMC7038220 DOI: 10.3390/ijerph17030971
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 3.390
Figure 1Workflow of our recommended method; * HOS: higher-order spectra; LSDA: locality sensitivity discriminant analysis.
Classification results of the various classifiers. KNN: k-nearest neighbor; SVMRBF: support vector machine with radial basis function; PNN: probabilistic neural network.
| Classifier | Number of Features | Accuracy (%) | Sensitivity (%) | Specificity (%) | Positive Predictive Value (%) |
|---|---|---|---|---|---|
| Linear discriminant analysis | 6 | 93.51 | 97.50 | 89.10 | 90.70 |
| Quadratic discriminant analysis | 5 | 85.71 | 87.50 | 83.78 | 85.37 |
| SVM | 6 | 93.51 | 97.50 | 89.19 | 90.70 |
| SVM | 5 | 97.40 | 97.50 | 97.30 | 97.50 |
| SVM | 4 | 96.10 | 95.00 | 97.30 | 97.44 |
| KNN | 3 | 92.21 | 92.50 | 91.90 | 92.50 |
| SVMRBF | 2 | 97.40 | 100.00 | 94.60 | 95.24 |
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Range (mean ± standard deviation) of features selected using t-test after linear discriminant analysis (LDA) feature reduction.
| Normal | ASD | |||||
|---|---|---|---|---|---|---|
| Features | Mean | SD | Mean | SD | ||
| LSDA13 | −1756.04 | 1126.778 | −801.964 | 1080.377 | 0.000309 | 3.786288 |
| LSDA8 | −1402.45 | 544.1245 | −2004.56 | 909.222 | 0.000711 | 3.55602 |
| LSDA9 | −886.62 | 264.4797 | −314.428 | 1157.47 | 0.003981 | 3.041854 |
| LSDA11 | 1918.153 | 1133.604 | 2545.265 | 1297.72 | 0.026577 | 2.262406 |
| LSDA7 | −583.943 | 600.9221 | −805.991 | 116.416 | 0.033149 | 2.209627 |
| LSDA2 | 133.0712 | 364.5094 | 291.3328 | 311.3471 | 0.044995 | 2.040697 |
| LSDA6 | −833.493 | 651.3617 | −998.316 | 145.0319 | 0.140299 | 1.505079 |
| LSDA1 | −385.252 | 98.16647 | −548.472 | 803.8656 | 0.209993 | 1.273933 |
| LSDA4 | −531.886 | 140.8786 | −567.485 | 125.164 | 0.246415 | 1.168582 |
| LSDA5 | −680.707 | 70.31738 | −691.059 | 23.01104 | 0.397739 | 0.854162 |
| LSDA14 | −657.845 | 501.4798 | −545.09 | 1308.884 | 0.614934 | 0.50615 |
| LSDA21 | −592.889 | 3.035538 | −590.386 | 44.26157 | 0.723211 | 0.356711 |
| LSDA10 | 796.1476 | 2058.705 | 922.609 | 867.6855 | 0.730657 | 0.346282 |
| LSDA12 | −5132.27 | 4467.789 | −4754.77 | 5277.353 | 0.735127 | 0.339583 |
| LSDA24 | −1464.89 | 71.78779 | −1461.35 | 7.848605 | 0.767 | 0.298501 |
| LSDA23 | −801.367 | 2047.65 | −706.917 | 504.8907 | 0.786254 | 0.273003 |
| LSDA28 | 1383.901 | 772.3631 | 1413.86 | 61.62772 | 0.815334 | 0.235248 |
| LSDA27 | 1029.853 | 696.2088 | 1005.313 | 73.09999 | 0.832258 | 0.213319 |
| LSDA29 | 585.8519 | 1.168018 | 585.4515 | 12.84125 | 0.845341 | 0.196346 |
| LSDA22 | −295.577 | 1400.244 | −339.624 | 97.81121 | 0.849659 | 0.19091 |
| LSDA17 | 445.7471 | 353.7109 | 485.0725 | 1609.695 | 0.880972 | 0.150629 |
| LSDA15 | 460.2031 | 37.12207 | 463.1301 | 119.2549 | 0.883222 | 0.147686 |
| LSDA19 | −592.541 | 1998.428 | −546.308 | 461.9218 | 0.891436 | 0.137369 |
| LSDA20 | −1035.72 | 1877.321 | −993.439 | 381.1509 | 0.893739 | 0.134455 |
| LSDA25 | −588.542 | 1679.106 | −621.33 | 116.2695 | 0.906315 | 0.118513 |
| LSDA16 | −1775.64 | 457.8857 | −1799.15 | 1321.607 | 0.91614 | 0.105843 |
| LSDA18 | −1565.5 | 2122.529 | −1523.15 | 1425.022 | 0.919109 | 0.101969 |
| LSDA26 | −663.813 | 14.99397 | −664.267 | 26.89385 | 0.926769 | 0.092285 |
| LSDA30 | −653.938 | 158.0741 | −653.208 | 37.69053 | 0.978273 | 0.027406 |
| LSDA3 | 346.7321 | 107.2744 | 338.2296 | 2320.293 | 0.981649 | 0.023149 |
Figure 2Classification accuracy versus number of features plot for the PNN model.
Figure 3Boxplots of the top-performing locality sensitivity discriminant analysis (LSDA) features (N = normal, A = autism spectrum disorder (ASD)).
Figure 4Bispectrum plots of (a) normal and (b) ASD classes (channel 64).
Figure 5Bispectrum plots of (a) normal and (b) ASD classes (channel 10).
Figure 6Bispectrum plots of (a) normal and (b) ASD classes (channel 50).
A summary of studies using computer-aided brain diagnostic system (CABDS) for the prediction/diagnosis of ASD using electroencephalogram (EEG) signals.
| Year Published | Techniques | Number of Participants/Database/Demographics | Results |
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Discrete wavelet transform Artefact removal (fast ICA) Regression Correlation coefficient | Caltech, PhysioNet, and Swartz Center for Computational Neuroscience: | Average correlation coefficient: |
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Nonlinear features | N: 1 subject | Nonlinear features can be used as pointers to diagnose at early stages of ASD. |
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Spectral power Mean coherence Paired Student’s | N: 24 subjects (boys; mean age of 6.05 ± 0.86 years) | Spectral power of theta rhythm was lower in autistic children than in healthy children, whereas gamma power was larger. |
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SVM Logistic regression Naïve Bayes | N: 30 subjects | |
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Fourier power spectral examination Coherence indices | Child Psychiatry Outpatient Clinic: | Statistically large differences in EEG power between the two groups; larger EEG power in delta and theta bands were found in the frontal and posterior regions. |
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Independent Pearson’s correlation coefficient Childhood autism rating scale | Psychiatric Outpatients Clinics, Faculty of Medicine | Abnormal EEG signals and brainwave regions were found to correlate with ASD severity. |
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Discrete wavelet transform Shannon entropy | King Abdulaziz University Brain Computer Interface Group: | |
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Hybrid model SVM classifiers Optimisation of feature (KNN-Genetic algorithm) | N: 6 boys (aged 7 to 9 years) | The method proposed is able to differentiate normal and ASD classes. |
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I-FAST technique Leave-one-out cross- validation Multi-scale entropy Random forest classifier | Villa Santa Maria Institute | |
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Wavelet transform Nonlinear features Statistical models ∙ | Boston Children’s Hospital/Harvard Medical School | Sp, se: close to 100% |
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Recurrence quantification analysis features SVM classifier Principal component analysis Leave-one-subject-out, 10-fold validations | N: 7 subjects (aged 2–6 years) | |
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Averaged multiscale entropy Extraction of EEG signals related to facial expressions Multiscale entropy scale curve profiles | Mild A: 18 patients | Mean multiscale entropy (MSE) values were found to be higher in children with mild A as compared to those with severe A. |
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SVM, artificial neural network classifiers Power spectral density Emotions, EEG signals Confusion matrixes | - | |
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Eye movements coupled with EEG SVM, logistic, deep neural network, naïve Bayes classifiers Statistical, entropy, FFT values 10 × 2 cross-validation | 34 participants | |
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Discrete wavelet transform Correlation-based feature selection Logistic, SVM, naïve Bayes, random forest classifiers | N: 5 subjectsA: | |
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Global functional connectivity Shapiro–Wilk test, Levene’s test Network-based statistics | N (low risk infants): 20 subjects | Insignificant increase in global functional connectivity and networks in the alpha range between high-risk (HR) and low-risk (LR) groups and other groups being compared. |
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| N: 37 healthy |
* N: normal, A: ASD, Ay: accuracy, Se: sensitivity, Sp: specificity.