Literature DB >> 32031597

Introduction to approaches and tools for the evaluation of protein cysteine oxidation.

Leslie B Poole1,2, Cristina M Furdui2,3, S Bruce King2,4.   

Abstract

Oxidative modifications of cysteine thiols in cellular proteins are pivotal to the way signal-stimulated reactive oxygen species are sensed and elicit appropriate or sometimes pathological responses, but the dynamic and often transitory nature of these modifications offer a challenge to the investigator trying to identify such sites and the responses they elicit. A number of reagents and workflows have been developed to identify proteins undergoing oxidation and to query the timing, extent and location of such modifications, as described in this minireview. While no approach is perfect to capture all the redox information in a functioning cell, best practices described herein can enable considerable insights into the "redox world" of cells and organisms.
© 2020 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.

Entities:  

Keywords:  chemical biology; cysteine oxidation; post translational modification; proteomics; redox methods

Year:  2020        PMID: 32031597      PMCID: PMC7477960          DOI: 10.1042/EBC20190050

Source DB:  PubMed          Journal:  Essays Biochem        ISSN: 0071-1365            Impact factor:   8.000


  97 in total

1.  Chemoselective ratiometric imaging of protein S-sulfenylation.

Authors:  Christopher T M B Tom; John E Crellin; Hashim F Motiwala; Matthew B Stone; Dahvid Davda; William Walker; Yu-Hsuan Kuo; Jeannie L Hernandez; Kristin J Labby; Lyanne Gomez-Rodriguez; Paul M Jenkins; Sarah L Veatch; Brent R Martin
Journal:  Chem Commun (Camb)       Date:  2017-06-29       Impact factor: 6.222

2.  The biotin switch method for the detection of S-nitrosylated proteins.

Authors:  S R Jaffrey; S H Snyder
Journal:  Sci STKE       Date:  2001-06-12

3.  Quantitative analysis of complex protein mixtures using isotope-coded affinity tags.

Authors:  S P Gygi; B Rist; S A Gerber; F Turecek; M H Gelb; R Aebersold
Journal:  Nat Biotechnol       Date:  1999-10       Impact factor: 54.908

4.  The inactivation of the acyl phosphatase activity catalyzed by the sulfenic acid form of glyceraldehyde 3-phosphate dehydrogenase by dimedone and olefins.

Authors:  L V Benitez; W S Allison
Journal:  J Biol Chem       Date:  1974-10-10       Impact factor: 5.157

5.  Use of 1-fluoro-2,4-dinitrobenzene as a probe for the presence of hydrodisulfide groups in proteins.

Authors:  T Sawahata; R A Neal
Journal:  Anal Biochem       Date:  1982-11-01       Impact factor: 3.365

6.  A chemical approach for detecting sulfenic acid-modified proteins in living cells.

Authors:  Khalilah G Reddie; Young Ho Seo; Wilson B Muse Iii; Stephen E Leonard; Kate S Carroll
Journal:  Mol Biosyst       Date:  2008-03-14

7.  Flavin-dependent alkyl hydroperoxide reductase from Salmonella typhimurium. 1. Purification and enzymatic activities of overexpressed AhpF and AhpC proteins.

Authors:  L B Poole; H R Ellis
Journal:  Biochemistry       Date:  1996-01-09       Impact factor: 3.162

Review 8.  Biological chemistry and functionality of protein sulfenic acids and related thiol modifications.

Authors:  Nelmi O Devarie-Baez; Elsa I Silva Lopez; Cristina M Furdui
Journal:  Free Radic Res       Date:  2015-11-11

9.  Protein sulfenation as a redox sensor: proteomics studies using a novel biotinylated dimedone analogue.

Authors:  Rebecca L Charles; Ewald Schröder; Georgina May; Paul Free; Piers R J Gaffney; Robin Wait; Shajna Begum; Richard J Heads; Philip Eaton
Journal:  Mol Cell Proteomics       Date:  2007-06-14       Impact factor: 5.911

10.  Direct cysteine sulfenylation drives activation of the Src kinase.

Authors:  David E Heppner; Christopher M Dustin; Chenyi Liao; Milena Hristova; Carmen Veith; Andrew C Little; Bethany A Ahlers; Sheryl L White; Bin Deng; Ying-Wai Lam; Jianing Li; Albert van der Vliet
Journal:  Nat Commun       Date:  2018-10-30       Impact factor: 14.919

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  5 in total

Review 1.  Guidelines for measuring reactive oxygen species and oxidative damage in cells and in vivo.

Authors:  Michael P Murphy; Hülya Bayir; Vsevolod Belousov; Christopher J Chang; Kelvin J A Davies; Michael J Davies; Tobias P Dick; Toren Finkel; Henry J Forman; Yvonne Janssen-Heininger; David Gems; Valerian E Kagan; Balaraman Kalyanaraman; Nils-Göran Larsson; Ginger L Milne; Thomas Nyström; Henrik E Poulsen; Rafael Radi; Holly Van Remmen; Paul T Schumacker; Paul J Thornalley; Shinya Toyokuni; Christine C Winterbourn; Huiyong Yin; Barry Halliwell
Journal:  Nat Metab       Date:  2022-06-27

2.  Bioinformatic Analyses of Peroxiredoxins and RF-Prx: A Random Forest-Based Predictor and Classifier for Prxs.

Authors:  Hussam Al-Barakati; Robert H Newman; Dukka B Kc; Leslie B Poole
Journal:  Methods Mol Biol       Date:  2022

Review 3.  Antioxidant Synergy of Mitochondrial Phospholipase PNPLA8/iPLA2γ with Fatty Acid-Conducting SLC25 Gene Family Transporters.

Authors:  Martin Jabůrek; Pavla Průchová; Blanka Holendová; Alexander Galkin; Petr Ježek
Journal:  Antioxidants (Basel)       Date:  2021-04-26

4.  Identification of Sulfenylated Cysteines in Arabidopsis thaliana Proteins Using a Disulfide-Linked Peptide Reporter.

Authors:  Bo Wei; Patrick Willems; Jingjing Huang; Caiping Tian; Jing Yang; Joris Messens; Frank Van Breusegem
Journal:  Front Plant Sci       Date:  2020-07-02       Impact factor: 5.753

5.  RedoxiFluor: A microplate technique to quantify target-specific protein thiol redox state in relative percentage and molar terms.

Authors:  Ahmet Tuncay; Anna Noble; Matthew Guille; James N Cobley
Journal:  Free Radic Biol Med       Date:  2022-02-04       Impact factor: 7.376

  5 in total

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