Literature DB >> 32027624

Epigenetic driver mutations in ARID1A shape cancer immune phenotype and immunotherapy.

Jing Li1,2, Weichao Wang1,2, Yajia Zhang3, Marcin Cieślik3,4,5, Jipeng Guo1,2, Mengyao Tan3, Michael D Green1,2,6, Weimin Wang1,2, Heng Lin1,2, Wei Li1,2, Shuang Wei1,2, Jiajia Zhou1,2, Gaopeng Li1,2, Xiaojun Jing3, Linda Vatan1,2, Lili Zhao7, Benjamin Bitler8, Rugang Zhang8, Kathleen R Cho3,5, Yali Dou3,5, Ilona Kryczek1,2, Timothy A Chan9, David Huntsman10,11, Arul M Chinnaiyan3,6,12,13,14, Weiping Zou1,2,3,5,15.   

Abstract

Whether mutations in cancer driver genes directly affect cancer immune phenotype and T cell immunity remains a standing question. ARID1A is a core member of the polymorphic BRG/BRM-associated factor chromatin remodeling complex. ARID1A mutations occur in human cancers and drive cancer development. Here, we studied the molecular, cellular, and clinical impact of ARID1A aberrations on cancer immunity. We demonstrated that ARID1A aberrations resulted in limited chromatin accessibility to IFN-responsive genes, impaired IFN gene expression, anemic T cell tumor infiltration, poor tumor immunity, and shortened host survival in many human cancer histologies and in murine cancer models. Impaired IFN signaling was associated with poor immunotherapy response. Mechanistically, ARID1A interacted with EZH2 via its carboxyl terminal and antagonized EZH2-mediated IFN responsiveness. Thus, the interaction between ARID1A and EZH2 defines cancer IFN responsiveness and immune evasion. Our work indicates that cancer epigenetic driver mutations can shape cancer immune phenotype and immunotherapy.

Entities:  

Keywords:  Cancer immunotherapy; Immunology; T cells

Mesh:

Substances:

Year:  2020        PMID: 32027624      PMCID: PMC7190935          DOI: 10.1172/JCI134402

Source DB:  PubMed          Journal:  J Clin Invest        ISSN: 0021-9738            Impact factor:   14.808


  65 in total

1.  A major chromatin regulator determines resistance of tumor cells to T cell-mediated killing.

Authors:  Deng Pan; Aya Kobayashi; Peng Jiang; Lucas Ferrari de Andrade; Rong En Tay; Adrienne M Luoma; Daphne Tsoucas; Xintao Qiu; Klothilda Lim; Prakash Rao; Henry W Long; Guo-Cheng Yuan; John Doench; Myles Brown; X Shirley Liu; Kai W Wucherpfennig
Journal:  Science       Date:  2018-01-04       Impact factor: 47.728

2.  Undifferentiated and Dedifferentiated Endometrial Carcinomas With POLE Exonuclease Domain Mutations Have a Favorable Prognosis.

Authors:  Iñigo Espinosa; Cheng-Han Lee; Emanuela D'Angelo; José Palacios; Jaime Prat
Journal:  Am J Surg Pathol       Date:  2017-08       Impact factor: 6.394

3.  Aerobic Glycolysis Controls Myeloid-Derived Suppressor Cells and Tumor Immunity via a Specific CEBPB Isoform in Triple-Negative Breast Cancer.

Authors:  Wei Li; Takashi Tanikawa; Ilona Kryczek; Houjun Xia; Gaopeng Li; Ke Wu; Shuang Wei; Lili Zhao; Linda Vatan; Bo Wen; Pan Shu; Duxin Sun; Celina Kleer; Max Wicha; Michael Sabel; Kaixiong Tao; Guobin Wang; Weiping Zou
Journal:  Cell Metab       Date:  2018-05-24       Impact factor: 27.287

4.  Primary Resistance to PD-1 Blockade Mediated by JAK1/2 Mutations.

Authors:  Daniel Sanghoon Shin; Jesse M Zaretsky; Helena Escuin-Ordinas; Angel Garcia-Diaz; Siwen Hu-Lieskovan; Anusha Kalbasi; Catherine S Grasso; Willy Hugo; Salemiz Sandoval; Davis Y Torrejon; Nicolaos Palaskas; Gabriel Abril Rodriguez; Giulia Parisi; Ariel Azhdam; Bartosz Chmielowski; Grace Cherry; Elizabeth Seja; Beata Berent-Maoz; I Peter Shintaku; Dung T Le; Drew M Pardoll; Luis A Diaz; Paul C Tumeh; Thomas G Graeber; Roger S Lo; Begoña Comin-Anduix; Antoni Ribas
Journal:  Cancer Discov       Date:  2016-11-30       Impact factor: 39.397

5.  MYC regulates the antitumor immune response through CD47 and PD-L1.

Authors:  Stephanie C Casey; Ling Tong; Yulin Li; Rachel Do; Susanne Walz; Kelly N Fitzgerald; Arvin M Gouw; Virginie Baylot; Ines Gütgemann; Martin Eilers; Dean W Felsher
Journal:  Science       Date:  2016-03-10       Impact factor: 47.728

6.  ARID1A mutations in endometriosis-associated ovarian carcinomas.

Authors:  Kimberly C Wiegand; Sohrab P Shah; Osama M Al-Agha; Yongjun Zhao; Kane Tse; Thomas Zeng; Janine Senz; Melissa K McConechy; Michael S Anglesio; Steve E Kalloger; Winnie Yang; Alireza Heravi-Moussavi; Ryan Giuliany; Christine Chow; John Fee; Abdalnasser Zayed; Leah Prentice; Nataliya Melnyk; Gulisa Turashvili; Allen D Delaney; Jason Madore; Stephen Yip; Andrew W McPherson; Gavin Ha; Lynda Bell; Sian Fereday; Angela Tam; Laura Galletta; Patricia N Tonin; Diane Provencher; Dianne Miller; Steven J M Jones; Richard A Moore; Gregg B Morin; Arusha Oloumi; Niki Boyd; Samuel A Aparicio; Ie-Ming Shih; Anne-Marie Mes-Masson; David D Bowtell; Martin Hirst; Blake Gilks; Marco A Marra; David G Huntsman
Journal:  N Engl J Med       Date:  2010-09-08       Impact factor: 91.245

7.  Mutant p53 prolongs NF-κB activation and promotes chronic inflammation and inflammation-associated colorectal cancer.

Authors:  Tomer Cooks; Ioannis S Pateras; Ohad Tarcic; Hilla Solomon; Aaron J Schetter; Sylvia Wilder; Guillermina Lozano; Eli Pikarsky; Tim Forshew; Nitzan Rosenfeld; Nitzan Rozenfeld; Noam Harpaz; Steven Itzkowitz; Curtis C Harris; Varda Rotter; Vassilis G Gorgoulis; Moshe Oren
Journal:  Cancer Cell       Date:  2013-05-13       Impact factor: 31.743

8.  A comprehensive molecular study on Coffin-Siris and Nicolaides-Baraitser syndromes identifies a broad molecular and clinical spectrum converging on altered chromatin remodeling.

Authors:  Dagmar Wieczorek; Nina Bögershausen; Filippo Beleggia; Sabine Steiner-Haldenstätt; Esther Pohl; Yun Li; Esther Milz; Marcel Martin; Holger Thiele; Janine Altmüller; Yasemin Alanay; Hülya Kayserili; Ludger Klein-Hitpass; Stefan Böhringer; Andreas Wollstein; Beate Albrecht; Koray Boduroglu; Almuth Caliebe; Krystyna Chrzanowska; Ozgur Cogulu; Francesca Cristofoli; Johanna Christina Czeschik; Koenraad Devriendt; Maria Teresa Dotti; Nursel Elcioglu; Blanca Gener; Timm O Goecke; Malgorzata Krajewska-Walasek; Encarnación Guillén-Navarro; Joussef Hayek; Gunnar Houge; Esra Kilic; Pelin Özlem Simsek-Kiper; Vanesa López-González; Alma Kuechler; Stanislas Lyonnet; Francesca Mari; Annabella Marozza; Michèle Mathieu Dramard; Barbara Mikat; Gilles Morin; Fanny Morice-Picard; Ferda Ozkinay; Anita Rauch; Alessandra Renieri; Sigrid Tinschert; G Eda Utine; Catheline Vilain; Rossella Vivarelli; Christiane Zweier; Peter Nürnberg; Sven Rahmann; Joris Vermeesch; Hermann-Josef Lüdecke; Michael Zeschnigk; Bernd Wollnik
Journal:  Hum Mol Genet       Date:  2013-08-01       Impact factor: 6.150

9.  Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma.

Authors:  Marios Giannakis; Xinmeng Jasmine Mu; Sachet A Shukla; Zhi Rong Qian; Ofir Cohen; Reiko Nishihara; Samira Bahl; Yin Cao; Ali Amin-Mansour; Mai Yamauchi; Yasutaka Sukawa; Chip Stewart; Mara Rosenberg; Kosuke Mima; Kentaro Inamura; Katsuhiko Nosho; Jonathan A Nowak; Michael S Lawrence; Edward L Giovannucci; Andrew T Chan; Kimmie Ng; Jeffrey A Meyerhardt; Eliezer M Van Allen; Gad Getz; Stacey B Gabriel; Eric S Lander; Catherine J Wu; Charles S Fuchs; Shuji Ogino; Levi A Garraway
Journal:  Cell Rep       Date:  2016-04-14       Impact factor: 9.423

10.  Myc Cooperates with Ras by Programming Inflammation and Immune Suppression.

Authors:  Roderik M Kortlever; Nicole M Sodir; Catherine H Wilson; Deborah L Burkhart; Luca Pellegrinet; Lamorna Brown Swigart; Trevor D Littlewood; Gerard I Evan
Journal:  Cell       Date:  2017-11-30       Impact factor: 41.582

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  41 in total

1.  Genetic alterations and expression characteristics of ARID1A impact tumor immune contexture and survival in early-onset gastric cancer.

Authors:  Jun Zou; Wan Qin; Lin Yang; Lulu Wang; Yu Wang; Jianfeng Shen; Wei Xiong; Shiying Yu; Shumei Song; Jaffer A Ajani; Shiaw-Yih Lin; Gordon B Mills; Xianglin Yuan; Jianying Chen; Guang Peng
Journal:  Am J Cancer Res       Date:  2020-11-01       Impact factor: 6.166

2.  RNF2 ablation reprograms the tumor-immune microenvironment and stimulates durable NK and CD4+ T-cell-dependent antitumor immunity.

Authors:  Zhuo Zhang; Lin Luo; Chuan Xing; Yu Chen; Peng Xu; Mao Li; Ling Zeng; Chao Li; Sadashib Ghosh; Deborah Della Manna; Tim Townes; William J Britt; Narendra Wajapeyee; Barry P Sleckman; Zechen Chong; Jianmei Wu Leavenworth; Eddy S Yang
Journal:  Nat Cancer       Date:  2021-10-22

3.  Microglia homeostasis mediated by epigenetic ARID1A regulates neural progenitor cells response and leads to autism-like behaviors.

Authors:  Libo Su; Mengtian Zhang; Fen Ji; Jinyue Zhao; Yuanyuan Wang; Wenwen Wang; Shukui Zhang; Hongyan Ma; Yanyan Wang; Jianwei Jiao
Journal:  Mol Psychiatry       Date:  2022-07-20       Impact factor: 13.437

4.  cBAF complex components and MYC cooperate early in CD8+ T cell fate.

Authors:  Ao Guo; Hongling Huang; Zhexin Zhu; Mark J Chen; Hao Shi; Sujing Yuan; Piyush Sharma; Jon P Connelly; Swantje Liedmann; Yogesh Dhungana; Zhenrui Li; Dalia Haydar; Mao Yang; Helen Beere; Jason T Yustein; Christopher DeRenzo; Shondra M Pruett-Miller; Jeremy Chase Crawford; Giedre Krenciute; Charles W M Roberts; Hongbo Chi; Douglas R Green
Journal:  Nature       Date:  2022-06-22       Impact factor: 69.504

Review 5.  EZH2-Targeted Therapies in Cancer: Hype or a Reality.

Authors:  Marie-Lisa Eich; James E Ferguson; Sooryanarayana Varambally; Mohammad Athar
Journal:  Cancer Res       Date:  2020-09-25       Impact factor: 12.701

6.  ARID1A mutations and expression loss in non-small cell lung carcinomas: clinicopathologic and molecular analysis.

Authors:  Yin P Hung; Amanda Redig; Jason L Hornick; Lynette M Sholl
Journal:  Mod Pathol       Date:  2020-06-22       Impact factor: 7.842

Review 7.  ARID1 proteins: from transcriptional and post-translational regulation to carcinogenesis and potential therapeutics.

Authors:  Olena Odnokoz; Cindy Wavelet-Vermuse; Shelby L Hophan; Serdar Bulun; Yong Wan
Journal:  Epigenomics       Date:  2021-04-23       Impact factor: 4.778

8.  Stanniocalcin 1 is a phagocytosis checkpoint driving tumor immune resistance.

Authors:  Heng Lin; Ilona Kryczek; Shasha Li; Michael D Green; Alicia Ali; Reema Hamasha; Shuang Wei; Linda Vatan; Wojciech Szeliga; Sara Grove; Xiong Li; Jing Li; Weichao Wang; Yijian Yan; Jae Eun Choi; Gaopeng Li; Yingjie Bian; Ying Xu; Jiajia Zhou; Jiali Yu; Houjun Xia; Weimin Wang; Ajjai Alva; Arul M Chinnaiyan; Marcin Cieslik; Weiping Zou
Journal:  Cancer Cell       Date:  2021-01-28       Impact factor: 31.743

Review 9.  Interferon-γ: teammate or opponent in the tumour microenvironment?

Authors:  Angela M Gocher; Creg J Workman; Dario A A Vignali
Journal:  Nat Rev Immunol       Date:  2021-06-21       Impact factor: 53.106

10.  A Signature-Based Classification of Gastric Cancer That Stratifies Tumor Immunity and Predicts Responses to PD-1 Inhibitors.

Authors:  Song Li; Jing Gao; Qian Xu; Xue Zhang; Miao Huang; Xin Dai; Kai Huang; Lian Liu
Journal:  Front Immunol       Date:  2021-06-11       Impact factor: 7.561

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